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-- Operators, Global Variables, ... --

! Logical Operators (base)
!= Relational Operators (base)
$ Extract or Replace Parts of an Object (base)
$<- Extract or Replace Parts of an Object (base)
%% Arithmetic Operators (base)
%*% Matrix Multiplication (base)
%/% Arithmetic Operators (base)
%in% Value Matching (base)
%o% Outer Product of Arrays (base)
%x% Kronecker Product of Arrays (base)
& Logical Operators (base)
&& Logical Operators (base)
* Arithmetic Operators (base)
+ Arithmetic Operators (base)
- Arithmetic Operators (base)
-> Assign a Value to a Name (base)
->> Assign a Value to a Name (base)
.Alias Create Alias (Pointer) to R Object (base)
.Autoloaded Loading and Listing of Packages (base)
.AutoloadEnv On-demand Loading of Packages (base)
.C Foreign Function Interface (base)
.Call Foreign Function Interface (base)
.Class Internal and Group Methods and Generic Functions (base)
.Defunct Defunct Functions (base)
.Deprecated Deprecated Functions (base)
.Device Control Multiple Devices (base)
.Devices Control Multiple Devices (base)
.Dyn.libs Loading Shared Libraries (base)
.External Foreign Function Interface (base)
.First Initialization at Start of an R Session (base)
.First.lib Loading and Listing of Packages (base)
.Fortran Foreign Function Interface (base)
.Generic Internal and Group Methods and Generic Functions (base)
.GlobalEnv Environment Access (base)
.Group Internal and Group Methods and Generic Functions (base)
.Internal Call an Internal Function (base)
.Last Terminate an R Session (base)
.Last.value Value of Last Evaluated Expression (base)
.lib.loc Loading and Listing of Packages (base)
.Library Loading and Listing of Packages (base)
.Machine Machine Characteristics (base)
.Method Internal and Group Methods and Generic Functions (base)
.NotYetImplemented Not Yet Implemented Functions and Unused Arguments (base)
.NotYetUsed Not Yet Implemented Functions and Unused Arguments (base)
.Options Options Settings (base)
.packages Loading and Listing of Packages (base)
.Pars Set or Query Graphical Parameters (base)
.Pars.readonly Set or Query Graphical Parameters (base)
.Platform Platform Specific Variables (base)
.PostScript.Options PostScript Graphics (base)
.Primitive Call a ``Primitive'' Internal Function (base)
.Provided Loading and Listing of Packages (base)
.Random.seed Random Number Generation (base)
.Rprofile Initialization at Start of an R Session (base)
.Traceback Print Call Stack of Last Error (base)
/ Arithmetic Operators (base)
: Sequence Generation (base)
< Relational Operators (base)
<- Assign a Value to a Name (base)
<<- Assign a Value to a Name (base)
<= Relational Operators (base)
== Relational Operators (base)
> Relational Operators (base)
>= Relational Operators (base)
? Documentation (base)
[ Extract or Replace Parts of an Object (base)
[.data.frame Extract or Replace Parts of an Object (base)
[.factor Extract or Replace Parts of an Object (base)
[.formula Extract or Replace Parts of an Object (base)
[.noquote Extract or Replace Parts of an Object (base)
[.pdBlocked Subscript a pdMat Object (nlme)
[.pdMat Subscript a pdMat Object (nlme)
[.ts Extract or Replace Parts of an Object (base)
[.tskernel Smoothing Kernel Objects (ts)
[<- Extract or Replace Parts of an Object (base)
[<-.data.frame Extract or Replace Parts of an Object (base)
[<-.factor Extract or Replace Parts of an Object (base)
[<-.noquote Extract or Replace Parts of an Object (base)
[<-.pdMat Subscript a pdMat Object (nlme)
[[ Extract or Replace Parts of an Object (base)
[[.data.frame Extract or Replace Parts of an Object (base)
[[<- Extract or Replace Parts of an Object (base)
[[<-.data.frame Extract or Replace Parts of an Object (base)
^ Arithmetic Operators (base)
| Logical Operators (base)
|| Logical Operators (base)
~ Model Formulae (base)

-- A --

abbey Determinations of Nickel Content (MASS)
abbreviate Abbreviate Strings (base)
abc.ci Nonparametric ABC Confidence Intervals (boot)
abcnon Nonparametric ABC Confidence Limits (bootstrap)
abcpar Parametric ABC Confidence Limits (bootstrap)
abline Add a Straight Line to a Plot (base)
abs Miscellaneous Mathematical Functions (base)
accdeaths Accidental Deaths in the US 1973-1978 (MASS)
accessC Get Smoothed Data from Wavelet Structure (wavethresh)
accessD Get wavelet expansion coefficients from wavelet structure. (wavethresh)
ace Alternating Conditional Expectations (acepack)
ACF Autocorrelation Function (nlme)
acf Calculate Sample Autocorrelation Function (timeslab)
ACF.gls Autocorrelation Function for gls Residuals (nlme)
ACF.lme Autocorrelation Function for lme Residuals (nlme)
acf1 Calculate Sample Autocorrelation Function (timeslab)
acme Monthly Excess Returns (boot)
acos Trigonometric Functions (base)
acosh Hyperbolic Functions (base)
actuator Actuator force experiment. (funfits)
actuator.calibrate Actuator calibration experiment. (funfits)
adapt Adaptive Integration in 1--20 Dimensions. (integrate)
add.constraint Add a constraint to an triangulaion object (tripack)
add.scope Compute Allowed Changes in Adding to or Dropping from a Formula (base)
add1 Add or Drop All Possible Single Terms to a Model (base)
add1.default Add or Drop All Possible Single Terms to a Model (base)
add1.glm Add or Drop All Possible Single Terms to a Model (base)
add1.lm Add or Drop All Possible Single Terms to a Model (base)
add1.mlm Add or Drop All Possible Single Terms to a Model (base)
addreg Additive nonparametric regression (funfits)
addterm Try All One-Term Additions to a Model (MASS)
adf.test Augmented Dickey-Fuller Test (tseries)
aggregate Compute Summary Statistics of Data Subsets (base)
aggregate.data.frame Compute Summary Statistics of Data Subsets (base)
aggregate.default Compute Summary Statistics of Data Subsets (base)
aggregate.ts Compute Summary Statistics of Data Subsets (base)
agnes Agglomerative Nesting (cluster)
agnes.object Agglomerative Nesting Object (cluster)
agriculture European Union Agricultural Workforces (cluster)
AIC Akaike Information Criterion (nlme)
AIC.gls Akaike Information Criterion (nlme)
AIC.lm Akaike Information Criterion (nlme)
AIC.lme Akaike Information Criterion (nlme)
AIC.lmList Akaike Information Criterion (nlme)
AIC.logLik AIC of a logLik Object (nlme)
AIC.nlme Akaike Information Criterion (nlme)
AIC.nls Akaike Information Criterion (nlme)
AIC.nlsList Akaike Information Criterion (nlme)
aic.opt.stable Stable Generalized Linear Regression Model (stable)
aic.stable Stable Generalized Linear Regression Model (stable)
aids Delay in AIDS Reporting in England and Wales (boot)
Aids2 Australian AIDS Survival Data (MASS)
aircondit Failures of Air-conditioning Equipment (boot)
aircondit7 Failures of Air-conditioning Equipment (boot)
airmiles Commercial Airline Mileage (base)
airquality New York Air Quality Measurements (base)
akima Waveform Distortion Data for Bivariate Interpolation (akima)
alias Find Aliases (Dependencies) in a Model (base)
alias.formula Find Aliases (Dependencies) in a Model (base)
alias.lm Find Aliases (Dependencies) in a Model (base)
aliasmat Discrete Distribution (e1071)
alist Lists -- Generic and Dotted Pairs (base)
all Are All Values True? (base)
all.equal Test if Two Objects are (Nearly) Equal (base)
all.equal.character Test if Two Objects are (Nearly) Equal (base)
all.equal.default Test if Two Objects are (Nearly) Equal (base)
all.equal.factor Test if Two Objects are (Nearly) Equal (base)
all.equal.formula Test if Two Objects are (Nearly) Equal (base)
all.equal.language Test if Two Objects are (Nearly) Equal (base)
all.equal.list Test if Two Objects are (Nearly) Equal (base)
all.equal.numeric Test if Two Objects are (Nearly) Equal (base)
all.names Find All Names in an Expression (base)
all.vars Find All Names in an Expression (base)
allCoef Extract Coefficients from a Set of Objects (nlme)
amif Auto Mutual Information Function (tseries)
amis Car Speeding and Warning Signs. (boot)
aml Acute Myelogenous Leukemia survival data (survival5)
Animals Brain and Body Weights for 28 Species (MASS)
animals Attributes of Animals (cluster)
anorexia Anorexia Data on Weight Change (MASS)
anova Anova Tables (base)
anova.glm Accessing Generalized Linear Model Fits (base)
anova.glm.null Accessing Generalized Linear Model Fits (base)
anova.glmlist Accessing Generalized Linear Model Fits (base)
anova.gls Compare Likelihoods of Fitted Objects (nlme)
anova.lm Accessing Linear Model Fits (base)
anova.lm.null Accessing Linear Model Fits (base)
anova.lme Compare Likelihoods of Fitted Objects (nlme)
anova.loess Local Polynomial Regression Fitting (modreg)
anova.mlm Anova Tables (base)
anova.negbin Likelihood Ratio Tests for Negative Binomial GLMs (MASS)
anovalist.lm Accessing Linear Model Fits (base)
ansari.test Ansari-Bradley Test (ctest)
anscombe Anscombe's Quartet of ``Identical'' Simple Linear Regressions (base)
any Are Values True? (base)
aov Fit an Analysis of Variance Model (base)
aperm Array Transposition (base)
append Vector Merging (base)
apply Apply Functions Over Array Margins (base)
approx Interpolation Functions (base)
approxfun Interpolation Functions (base)
approx[fun] Interpolation Functions (base)
apropos Find Objects by (Partial) Name (base)
ar Fit autoregressive models to time series (bats)
ar.burg Fit Autoregressive Models to Time Series (ts)
ar.burg.default Fit Autoregressive Models to Time Series (ts)
ar.burg.mts Fit Autoregressive Models to Time Series (ts)
ar.mle Fit Autoregressive Models to Time Series (ts)
ar.ols Fit Autoregressive Models to Time Series by OLS (ts)
ar.yw Fit autoregressive model by solving Yule-Walker equations (bats)
ar.yw.default Fit Autoregressive Models to Time Series (ts)
ar.yw.mts Fit Autoregressive Models to Time Series (ts)
arcorr Calculate AR Autocorrelation Function (timeslab)
ardt Simulate Data from an AR Process (timeslab)
area Adaptive Numerical Integration (MASS)
arfilt Apply an AR Filter to a Matrix (timeslab)
Arg Complex Vectors (base)
args Argument List of a Function (base)
arima0 ARIMA Modelling of Time Series -- Preliminary Version (ts)
arima0.diag ARIMA Modelling of Time Series -- Preliminary Version (ts)
Arithmetic Arithmetic Operators (base)
arma Form Plots Illustrating Patterns in ARMA Processes (timeslab)
arma0f Internal ts functions (ts)
armacorr Calculate ARMA Autocorrelation Function (timeslab)
armadt Simulate Data from an ARMA Process (timeslab)
armapart Calculate ARMA Partial Autocorrelation Function (timeslab)
armapred Calculate Exact Predictions for an ARMA Process (timeslab)
armasp Calculate ARMA Spectral Density Function (timeslab)
arpart Calculate AR Partial Autocorrelation Function (timeslab)
array Multi-way Arrays (base)
arrows Add Arrows to a Plot (base)
arsp Calculate AR Spectral Density (timeslab)
arsppeak Find Peak Frequencies in AR Spectra (timeslab)
as.array Multi-way Arrays (base)
as.call Function Calls (base)
as.character Character Vectors (base)
as.character.default Character Vectors (base)
as.complex Complex Vectors (base)
as.complex.default Complex Vectors (base)
as.data.frame Data Frames (base)
as.data.frame.AsIs Data Frames (base)
as.data.frame.character Data Frames (base)
as.data.frame.complex Data Frames (base)
as.data.frame.data.frame Data Frames (base)
as.data.frame.default Data Frames (base)
as.data.frame.factor Data Frames (base)
as.data.frame.integer Data Frames (base)
as.data.frame.list Data Frames (base)
as.data.frame.logical Data Frames (base)
as.data.frame.matrix Data Frames (base)
as.data.frame.mlbench Convert an mlbench object to a dataframe (mlbench)
as.data.frame.model.matrix Data Frames (base)
as.data.frame.numeric Data Frames (base)
as.data.frame.ordered Data Frames (base)
as.data.frame.ts Data Frames (base)
as.data.frame.vector Data Frames (base)
as.data.frame.xyVector Construct an xyVector Object (splines)
as.date Coerce data to date form (date)
as.dist Distance Matrix Computation (mva)
as.double Double Precision Vectors (base)
as.double.default Double Precision Vectors (base)
as.expression Unevaluated Expressions (base)
as.expression.default Unevaluated Expressions (base)
as.factor Factors (base)
as.formula Model Formulae (base)
as.function Convert Object to Function (base)
as.function.default Convert Object to Function (base)
as.function.polynomial Coerce a Polynomial to a Function (polynom)
as.hclust Convert Objects to Class hclust (mva)
as.hclust.twins Convert Objects to Class hclust (mva)
as.integer Integer Vectors (base)
as.integer.default Integer Vectors (base)
as.list Lists -- Generic and Dotted Pairs (base)
as.list.data.frame Lists -- Generic and Dotted Pairs (base)
as.list.default Lists -- Generic and Dotted Pairs (base)
as.logical Logical Vectors (base)
as.logical.default Logical Vectors (base)
as.matrix Matrices (base)
as.matrix.corStruct Matrix of a corStruct Object (nlme)
as.matrix.data.frame Matrices (base)
as.matrix.default Matrices (base)
as.matrix.dist Distance Matrix Computation (mva)
as.matrix.noquote Class for ``no quote'' Printing of Strings (base)
as.matrix.pdMat Matrix of a pdMat Object (nlme)
as.matrix.reStruct Matrices of an reStruct Object (nlme)
as.mcmc Markov Chain Monte Carlo Objects (coda)
as.mcmc.list Replicated Markov Chain Monte Carlo Objects (coda)
as.name Variable Names (base)
as.null The Null Object (base)
as.null.default The Null Object (base)
as.numeric Numeric Vectors (base)
as.ordered Factors (base)
as.pairlist Lists -- Generic and Dotted Pairs (base)
as.polynomial Polynomials (polynom)
as.polySpline Piecewise Polynomial Spline Representation (splines)
as.qr The QR Decomposition of a Matrix (base)
as.real Real Vectors (base)
as.single Double Precision Vectors (base)
as.single.default Double Precision Vectors (base)
as.surface Creates an object for plotting using contour, persp or image (funfits)
as.ts Time-Series Objects (base)
as.ts.mcmc Coerce mcmc object to time series (coda)
as.vector Vectors (base)
as.vector.factor Vectors (base)
ash1 Computes univariate averaged shifted histogram (polynomial kernel) (ash)
ash2 Compute bivariate ASH estimate (product polynomial kernel) (ash)
asin Trigonometric Functions (base)
asinh Hyperbolic Functions (base)
ask Ask data to be typed on the keyboard. (sm)
asOneFormula Combine Formulas of a Set of Objects (nlme)
asOneSidedFormula Convert to One-Sided Formula (nls)
assign Assign a Value to a Name (base)
asTable Convert groupedData to a matrix (nlme)
asTable.groupedData Convert groupedData to a matrix (nlme)
asVector Coerce an Object to a Vector (splines)
asVector.xyVector Coerce an Object to a Vector (splines)
atan Trigonometric Functions (base)
atan2 Trigonometric Functions (base)
atanh Hyperbolic Functions (base)
attach Attach Set of R Objects to Search Path (base)
attenu The Joyner-Boore Attenuation Data (base)
attitude Attitudes Toward Supervisors (base)
attr Object Attributes (base)
attr.all.equal Test if Two Objects are (Nearly) Equal (base)
attr<- Object Attributes (base)
attributes Object Attribute Lists (base)
attributes<- Object Attribute Lists (base)
augPred Augmented Predictions (nlme)
augPred.gls Augmented Predictions (nlme)
augPred.lme Augmented Predictions (nlme)
augPred.lmList Augmented Predictions (nlme)
austres Quarterly Time Series of the Number of Australian Residents (MASS)
auto.paint Data frame of paint measurements from the hood of a car. (funfits)
autocorr Autocorrelation function for Markov chains (coda)
autocorr.plot Plot autocorrelations for Markov Chains (coda)
autoload On-demand Loading of Packages (base)
autoloader On-demand Loading of Packages (base)
avas Additivity and variance stabilization for regression (acepack)
ave Group Averages Over Level Combinations of Factors (base)
awe Approximate weight of evidence for model-based hierarchical clustering. (mclust)
axis Add an Axis to a Plot (base)

-- B --

backsolve Solve an Upper or Lower Triangular System (base)
backSpline Monotone Inverse Spline (splines)
backSpline.nbSpline Monotone Inverse Spline (splines)
backSpline.npolySpline Monotone Inverse Spline (splines)
balancedGrouped Create a groupedData object from a matrix (nlme)
bandwidth.kernel Smoothing Kernel Objects (ts)
barley A barley split plot field trial (Rnotes)
barplot Bar Plots (base)
barplot.default Bar Plots (base)
bartlett.test Bartlett Test for Homogeneity of Variances (ctest)
basename File Manipulation (base)
BATCH Batch Execution of R (base)
bayesclass Bayes classifier (mlbench)
bayesclass.mlbench.2dnormals Bayes classifier (mlbench)
bayesclass.mlbench.cassini Bayes classifier (mlbench)
bayesclass.mlbench.circle Bayes classifier (mlbench)
bayesclass.mlbench.cuboids Bayes classifier (mlbench)
bayesclass.mlbench.ringnorm Bayes classifier (mlbench)
bayesclass.mlbench.threenorm Bayes classifier (mlbench)
bayesclass.mlbench.twonorm Bayes classifier (mlbench)
bayesclass.mlbench.xor Bayes classifier (mlbench)
bayesclass.noerr Bayes classifier (mlbench)
bcanon Nonparametric BCa Confidence Limits (bootstrap)
bcv Biased Cross-Validation for Bandwidth Selection (MASS)
BD Data frame of the effect of buffer compositions on DNA strand displacement amplification. (funfits)
BD2 (funfits)
bds.test BDS Test (tseries)
bea Bond Energy Algorithm (multiv)
beaujolais The Beaujolais Quality Data (Rnotes)
beav1 Body Temperature Series of Beaver 1 (MASS)
beav2 Body Temperature Series of Beaver 2 (MASS)
beaver Beaver Body Temperature Data (boot)
beaver1 Body Temperature Series of Two Beavers (ts)
beaver2 Body Temperature Series of Two Beavers (ts)
beavers Body Temperature Series of Two Beavers (ts)
Bennett5 Magentization modelling (NISTnls)
Bessel Bessel Functions (base)
bessel Bessel Functions (base)
besselI Bessel Functions (base)
besselJ Bessel Functions (base)
besselK Bessel Functions (base)
besselY Bessel Functions (base)
Beta The Beta Distribution (base)
beta Special Functions of Mathematics (base)
Beta Binomial The Beta Binomial Distribution (rmutil)
BIC Bayesian Information Criterion (nlme)
bic BIC for parameterized MVN mixture models (mclust)
BIC.gls Bayesian Information Criterion (nlme)
BIC.lm Bayesian Information Criterion (nlme)
BIC.lme Bayesian Information Criterion (nlme)
BIC.lmList Bayesian Information Criterion (nlme)
BIC.logLik BIC of a logLik Object (nlme)
BIC.nlme Bayesian Information Criterion (nlme)
BIC.nls Bayesian Information Criterion (nlme)
BIC.nlsList Bayesian Information Criterion (nlme)
bigcity Population of U.S. Cities (boot)
bin1 Function to compute array of bin counts for a data vector (ash)
bin2 Bin bivariate data x (ash)
bincombinations Binary Combinations (e1071)
binnest Binary Random Effects Model with Two Levels of Nesting (repeated)
binning Construct frequency table from raw data (sm)
binom.test Exact Binomial Test (ctest)
Binomial The Binomial Distribution (base)
binomial Family Objects for Models (base)
biopsy Biopsy Data on Breast Cancer Patients (MASS)
biplot Biplot of Multivariate Data (mva)
biplot.default Biplot of Multivariate Data (mva)
biplot.princomp Biplot for Principal Components (mva)
birthwt Risk Factors for Low Birth Weight (boot)
biv.betab Bivariate Beta-binomial Regression (repeated)
biv.binom Marginal Bivariate Binomial Regression (repeated)
BJsales Sales Data with Leading Indicator. (ts)
BJsales.lead Sales Data with Leading Indicator. (ts)
bkde Compute a Binned Kernel Density Estimate (KernSmooth)
bkde2D Compute a 2D Binned Kernel Density Estimate (KernSmooth)
bkfe Compute a Binned Kernel Functional Estimate (KernSmooth)
bladder Bladder Cancer Recurrences (survival5)
BOD Biochemical Oxygen Demand (nls)
body Access to and Manipulation of the Body of a Function (base)
body<- Access to and Manipulation of the Body of a Function (base)
boot Bootstrap Resampling (boot)
boot.array Bootstrap Resampling Arrays (boot)
boot.ci Nonparametric Bootstrap Confidence Intervals (boot)
boot.object Bootstrap Output Objects (boot)
bootci.object Bootstrap Confidence Interval Objects (boot)
bootpred Bootstrap Estimates of Prediction Error (bootstrap)
bootstrap Non-Parametric Bootstrapping (bootstrap)
boott Bootstrap-t Confidence Limits (bootstrap)
border Cricket Batting Dataset (locfit)
Boston Housing Values in Suburbs of Boston (MASS)
BostonHousing Boston Housing Data (mlbench)
box Draw a Box around a Plot (base)
Box-Cox The Box-Cox Distribution (rmutil)
Box.test Box--Pierce and Ljung--Box Tests (ts)
boxcox Box-Cox Transformations for Linear Models (MASS)
boxplot Box Plots (base)
boxplot.default Box Plots (base)
boxplot.formula Formula Notation for Boxplots (base)
boxplot.stats Box Plot Statistics (base)
bp Create a Vector of Cumulative Numbers of Previous Events for a Point Process (event)
bplot boxplot (funfits)
bptest Breusch-Pagan-Test (lmtest)
brambles Spatial Location of Bramble Canes (boot)
break Control Flow (base)
BreastCancer Wisconsin Breast Cancer Database (mlbench)
breslow Smoking Deaths Among Doctors (boot)
browser Environment Browser (base)
bruto Fit an additive spline model by adaptive backfitting (mda)
bs Generate a Basis for Polynomial Splines (splines)
bug.report Send a Bug Report (base)
Burr The Burr Distribution (rmutil)
bxp Box Plots from Summaries (base)

-- C --

C Sets Contrasts for a Factor (base)
c Combine Values into a Vector or List (base)
ca Correspondence Analysis (multiv)
cabbages Data from a cabbage field trial (MASS)
caith Colours of Eyes and Hair of People in Caithness (MASS)
calcium Calcium Uptake Data (boot)
call Function Calls (base)
cancer Mayo Clinic Lung Cancer Data (survival5)
cancor Canonical Correlations (mva)
cane Sugar-cane Disease Data (boot)
capability Simulated Manufacturing Process Data (boot)
capture Capture-recapture Model (repeated)
carma Continuous ARMA for Unequally Spaced Repeated Measurements (growth)
cars Stopping Distances of Cars (base)
Cars93 Data from 93 Cars on Sale in the USA in 1993 (MASS)
case.names Case and Variable Names of Fitted Models (base)
case.names.default Case and Variable Names of Fitted Models (base)
case.names.lm Case and Variable Names of Fitted Models (base)
case/variable.names Case and Variable Names of Fitted Models (base)
cat Concatenate and Print (base)
category Defunct Functions (base)
catheter Meta-analysis of antibacterial catheter coating (rmeta)
catmiss Marginal probabilities for categorical repeated measures with missing data (repeated)
cats Weight Data for Domestic Cats (boot)
Cauchy The Cauchy Distribution (base)
cav Position of Muscle Caveolae (boot)
cbind Combine Columns/Rows into a Matrix (base)
cbind.data.frame Combine Columns/Rows into a Matrix (base)
cbind.ts Bind Two or More Time Series (ts)
ccf Autocovariance and Autocorrelation Function Estimation (ts)
cclust Convex Clustering (cclust)
cd4 CD4 Counts for HIV-Positive Patients (boot)
cd4.nested Nested Bootstrap of `cd4' data (boot)
ceiling Rounding of Numbers (base)
cement Cement Composition Data (boot)
censboot Bootstrap for Censored Data (boot)
censcale Centering and Scaling of Data (mclust)
change.origin Change Origin for a Polynomial (polynom)
channing Channing House Data (boot)
character Character Vectors (base)
charmatch Partial String Matching (base)
check.commonprob Check Joint Binary Probabilities (bindata)
check.options Set Options with Consistency Checks (base)
chem Copper in Wholemeal Flour (MASS)
chickwts Chicken Weights by Feed Type (base)
chidden Continuous-Time Hidden Markov Chain Models (repeated)
chisq.test Pearson's Chi-square Test for Count Data (base)
Chisquare The (non-central) Chi-Square Distribution (base)
chlorine The Chlorine availability data. (Rnotes)
chol The Choleski Decomposition (base)
chol2inv Inverse from Choleski Decomposition (base)
choose Special Functions of Mathematics (base)
chron Create a Chronological Object (chron)
chull Compute Convex Hull of a Set of Points (base)
Chwirut1 Ultrasonic calibration study 1 (NISTnls)
Chwirut2 Ultrasonic calibration data 2 (NISTnls)
city Population of U.S. Cities (boot)
clara Clustering Large Applications (cluster)
clara.object Clustering Large Applications Object (cluster)
claridge Genetic Links to Left-handedness (boot)
class Object Classes (base)
class.ind Generates Class Indicator Matrix from a Factor (nnet)
class<- Object Classes (base)
clearNames Remove the Names from an Object (nls)
climate Climate and geographical data for 50 largest US cities. Information on 50 largest US cities. List components: lon: longitude lat: latitude jan: average minimum January temperature (degrees F) rain: average rainfall in inches city: city names jul: average maximum July temperature elev: Elevation above sea level in KW. Reference: The Universal Almanac (1992), ed. John W. Wright, Andrews and McNeel, Kansas City. (funfits)
clip Clip a Vector Above and Below (timeslab)
close.screen Creating and Controlling Multiple Screens on a Single Device (base)
close.socket Close a Socket (base)
cloth Number of Flaws in Cloth (boot)
cloud The Cloud Point Data (Rnotes)
clpairs Classifications for hierarchical clustering. (mclust)
cltest Test dataset for classification (locfit)
cltrain Training dataset for classification (locfit)
clusplot Clusplot - Generic Function (cluster)
clusplot.default bivariate clusplot (cluster)
clusplot.partition Bivariate clusplot of a partitioning object (cluster)
cluster Identify Clusters (survival5)
clustindex Cluster Indexes (cclust)
cm Graphical Units (base)
cm.colors Color Palettes (base)
cmdscale Classical (Metric) Multidimensional Scaling (mva)
co.intervals Conditioning Plots (base)
co.transfer Carbon Monoxide Transfer (boot)
co2 Mauna Loa Atmospheric CO2 Concentration (base)
coal Dates of Coal Mining Disasters (boot)
codamenu Main menu driver for the coda package (coda)
codes Factor Codes (base)
codes.factor Factor Codes (base)
codes.ordered Factor Codes (base)
codes<- Factor Codes (base)
coef Extract Model Coefficients (base)
coef.aov Extract Model Coefficients (base)
coef.corAR1 Coefficients of a corStruct Object (nlme)
coef.corARMAd Coefficients of a corStruct Object (nlme)
coef.corCAR1 Coefficients of a corStruct Object (nlme)
coef.corCompSymm Coefficients of a corStruct Object (nlme)
coef.corHF Coefficients of a corStruct Object (nlme)
coef.corIdent Coefficients of a corStruct Object (nlme)
coef.corLin Coefficients of a corStruct Object (nlme)
coef.corSpatial Coefficients of a corStruct Object (nlme)
coef.corSpher Coefficients of a corStruct Object (nlme)
coef.corStruct Coefficients of a corStruct Object (nlme)
coef.corSymm Coefficients of a corStruct Object (nlme)
coef.default Extract Model Coefficients (base)
coef.garch Fit GARCH Models to Time Series (tseries)
coef.glm Extract Model Coefficients (base)
coef.gls Extract gls Coefficients (nlme)
coef.gnls Extract gnls Coefficients (nlme)
coef.listof Extract Model Coefficients (base)
coef.lm Extract Model Coefficients (base)
coef.lme Extract lme Coefficients (nlme)
coef.lmList Extract lmList Coefficients (nlme)
coef.modelStruct Extract modelStruct Object Coefficients (nlme)
coef.nls Nonlinear Least Squares (nls)
coef.pdBlocked pdMat Object Coefficients (nlme)
coef.pdCompSymm pdCompSymm Object Coefficients (nlme)
coef.pdDiag pdDiag Object Coefficients (nlme)
coef.pdIdent pdIdent Object Coefficients (nlme)
coef.pdMat pdMat Object Coefficients (nlme)
coef.pdNatural pdMat Object Coefficients (nlme)
coef.pdSymm pdMat Object Coefficients (nlme)
coef.reStruct reStruct Object Coefficients (nlme)
coef.tukeyline Robust Line Fitting (eda)
coef.varComb varFunc Object Coefficients (nlme)
coef.varConstPower varFunc Object Coefficients (nlme)
coef.varExp varFunc Object Coefficients (nlme)
coef.varFixed varFunc Object Coefficients (nlme)
coef.varFunc varFunc Object Coefficients (nlme)
coef.varIdent varFunc Object Coefficients (nlme)
coef.varPower varFunc Object Coefficients (nlme)
coef<- Assign Values to Coefficients (nlme)
coef<-.corAR1 Coefficients of a corStruct Object (nlme)
coef<-.corARMAd Coefficients of a corStruct Object (nlme)
coef<-.corCAR1 Coefficients of a corStruct Object (nlme)
coef<-.corCompSymm Coefficients of a corStruct Object (nlme)
coef<-.corHF Coefficients of a corStruct Object (nlme)
coef<-.corIdent Coefficients of a corStruct Object (nlme)
coef<-.corLin Coefficients of a corStruct Object (nlme)
coef<-.corSpatial Coefficients of a corStruct Object (nlme)
coef<-.corSpher Coefficients of a corStruct Object (nlme)
coef<-.corStruct Coefficients of a corStruct Object (nlme)
coef<-.corSymm Coefficients of a corStruct Object (nlme)
coef<-.modelStruct Extract modelStruct Object Coefficients (nlme)
coef<-.pdBlocked pdMat Object Coefficients (nlme)
coef<-.pdMat pdMat Object Coefficients (nlme)
coef<-.reStruct reStruct Object Coefficients (nlme)
coef<-.varComb varFunc Object Coefficients (nlme)
coef<-.varConstPower varFunc Object Coefficients (nlme)
coef<-.varExp varFunc Object Coefficients (nlme)
coef<-.varFixed varFunc Object Coefficients (nlme)
coef<-.varIdent varFunc Object Coefficients (nlme)
coef<-.varPower varFunc Object Coefficients (nlme)
coeffcsd Calculate Asymptotic Standard Errors of ARMA MLE's (timeslab)
coefficients Extract Model Coefficients (base)
coefficients.fmr Fit a Generalized Nonlinear Regression Model with a Two or Three Point Mixture (gnlm)
coefficients.gar Generalized autoregression (repeated)
coefficients.glm Accessing Generalized Linear Model Fits (base)
coefficients.gnlr Fit a Generalized Nonlinear Regression Model (gnlm)
coefficients.gnlr3 Fit a Generalized Nonlinear Regression Model for Three Parameter Distributions (gnlm)
coefficients.lm Accessing Linear Model Fits (base)
coefficients.nbkal Negative Binomial Model with Kalman Update (repeated)
coefficients.nlr Nonlinear Regression (gnlm)
coefficients.potthoff Potthoff and Roy growth curve model (growth)
coefficients.stable Stable Generalized Linear Regression Model (stable)
coefficients.tukeyline Robust Line Fitting (eda)
col Column Indexes (base)
collapse Collapse According to Groups (nlme)
collapse.groupedData Collapse a groupedData Object (nlme)
colnames Row and Columnn Names (base)
colnames<- Row and Columnn Names (base)
colors Color Names (base)
colours Color Names (base)
commandArgs Extract Command Line Arguments (base)
comment Query or Set a `Comment' Attribute (base)
comment<- Query or Set a `Comment' Attribute (base)
CommonProb Simulate Joint Binary Probabilities (bindata)
commonprob2sigma Calculate a Covariance Matrix for the Normal Distribution out of a Matrix of Joint Probabilites. (bindata)
compareFits Compare Fitted Objects (nlme)
comparePred Compare Predictions (nlme)
comparePred.gls Compare Predictions (nlme)
comparePred.lme Compare Predictions (nlme)
comparePred.lmList Compare Predictions (nlme)
Comparison Relational Operators (base)
COMPILE Compile Files for Use with R (base)
complete.cases Find Complete Cases (base)
complex Complex Vectors (base)
compress Compression - Generic function (wavelet) (wavethresh)
compress.default Compress a (Wavelet) Vector (wavethresh)
compress.imwd `Compress' Method for `imwd' Object (wavethresh)
compressed.object Compressed (Wavelet) Object (wavethresh)
condense Condense training set for k-NN classifier (class)
condprob Conditional Probabilities of Binary Data (bindata)
confint Confidence Intervals for Model Parameters (MASS)
conflicts Search for Masked Objects on the Search Path (base)
confusion compute the confusion matrix between two factors, or for an fda or mda object (mda)
Conj Complex Vectors (base)
Constants Built-in Constants (base)
contour Display Contours (base)
contr.helmert Contrast Matrices (base)
contr.poly Contrast Matrices (base)
contr.sum Contrast Matrices (base)
contr.treatment Contrast Matrices (base)
Contrast Contrast Matrices (base)
contrasts Get and Set Contrast Matrices (base)
contrasts<- Get and Set Contrast Matrices (base)
contrib.url Download Packages from CRAN (base)
contributors R Project Contributors (base)
Control Control Flow (base)
control Control Variate Calculations (boot)
convex.hull Return the convex hull of a triangulation object (tripack)
convolve Fast Convolution (base)
cooks.distance Regression Diagnostics (base)
coop Co-operative Trial in Analytical Chemistry (MASS)
coplot Conditioning Plots (base)
copy.url Read Data and Code from a Web Server (base)
copyright Copyrights of Files Used to Build R (base)
copyrights Copyrights of Files Used to Build R (base)
cor Correlation and Covariance Matrices (base)
cor.test Test for Zero Correlation (ctest)
corAR1 AR(1) Correlation Structure (nlme)
corARMA ARMA(p,q) Correlation Structure (nlme)
corCAR1 Continuous AR(1) Correlation Structure (nlme)
corClasses Correlation Structure Classes (nlme)
corCompSymm Compound Symmetry Correlation Structure (nlme)
corExp Exponential Correlation Structure (nlme)
corFactor Factor of a Correlation Matrix (nlme)
corFactor.compSymm Factor of a corStruct Object Matrix (nlme)
corFactor.corAR1 Factor of a corStruct Object Matrix (nlme)
corFactor.corARMA Factor of a corStruct Object Matrix (nlme)
corFactor.corCAR1 Factor of a corStruct Object Matrix (nlme)
corFactor.corHF Factor of a corStruct Object Matrix (nlme)
corFactor.corSpatial Factor of a corStruct Object Matrix (nlme)
corFactor.corStruct Factor of a corStruct Object Matrix (nlme)
corFactor.corSymm Factor of a corStruct Object Matrix (nlme)
corGaus Gaussian Correlation Structure (nlme)
corgram Calculate and plot a correlogram (growth)
corLin Linear Correlation Structure (nlme)
corMatrix Extract Correlation Matrix (nlme)
corMatrix.compSymm Matrix of a corStruct Object (nlme)
corMatrix.corAR1 Matrix of a corStruct Object (nlme)
corMatrix.corARMA Matrix of a corStruct Object (nlme)
corMatrix.corCAR1 Matrix of a corStruct Object (nlme)
corMatrix.corHF Matrix of a corStruct Object (nlme)
corMatrix.corSpatial Matrix of a corStruct Object (nlme)
corMatrix.corStruct Matrix of a corStruct Object (nlme)
corMatrix.corSymm Matrix of a corStruct Object (nlme)
corMatrix.pdBlocked Extract Correlation Matrix from a pdMat Object (nlme)
corMatrix.pdCompSymm Extract Correlation Matrix from a pdMat Object (nlme)
corMatrix.pdDiag Extract Correlation Matrix from a pdMat Object (nlme)
corMatrix.pdIdent Extract Correlation Matrix from a pdMat Object (nlme)
corMatrix.pdMat Extract Correlation Matrix from a pdMat Object (nlme)
corMatrix.pdSymm Extract Correlation Matrix from a pdMat Object (nlme)
corMatrix.reStruct Extract Correlation Matrix from Components of an reStruct Object (nlme)
corr Correlation Coefficient (boot)
corrar Calculate AR Parameters from Autocorrelations (timeslab)
corrarma Calculate ARMA Parameters from Autocorrelations (timeslab)
corRatio Rational Quadratic Correlation Structure (nlme)
corrdt Simulate Data Having Specified Autocorrelations (timeslab)
correlogram Compute Spatial Correlograms (spatial)
corresp Simple Correspondence Analysis (MASS)
corrma Calculate MA Parameters from Autocorrelations (timeslab)
corSpatial Spatial Correlation Structure (nlme)
corSpher Spherical Correlation Structure (nlme)
corSymm General Correlation Structure (nlme)
cos Trigonometric Functions (base)
cosh Hyperbolic Functions (base)
count.fields Count the Number of Fields per Line (base)
cov Correlation and Covariance Matrices (base)
cov.mcd Resistant Estimation of Multivariate Location and Scatter (lqs)
cov.mve Resistant Estimation of Multivariate Location and Scatter (lqs)
cov.rob Resistant Estimation of Multivariate Location and Scatter (lqs)
cov.trob Covariance Estimation for Multivariate t Distribution (MASS)
cov.wt Weighted Covariance Matrices (base)
covariate<- Assign Covariate Values (nlme)
covariate<-.varFunc Assign varFunc Covariate (nlme)
cover.design Generate a coverage design. (funfits)
covind Create or add to a time-constant covariate (tccov) object (rmutil)
covratio Regression Diagnostics (base)
cox.zph Test the Proportional Hazards Assumption of a Cox Regression (survival5)
coxph Fit Proportional Hazards Regression Model (survival5)
coxph.detail Details of a Cox Model Fit (survival5)
coxph.object Proportional Hazards Regression Object (survival5)
coxph.rvar Robust variance for a Cox model (survival4)
coxre Cox Proportional Hazards Model with Random Effect (event)
cpgram Plot Cumulative Periodogram (MASS)
cprocess Counting Process Plot (event)
cpus Performance of Computer CPUs (MASS)
crabs Morphological Measurements on Leptograpsus Crabs (MASS)
CRAN.packages Download Packages from CRAN (base)
crlag Apply the Circular Shift Operator to a Vector (timeslab)
crosscorr Cross correlations for MCMC output (coda)
crosscorr.plot Plot image of correlation matrix (coda)
crossprod Matrix Crossproduct (base)
crossval K-fold Cross-Validation (bootstrap)
cum3 Calculate Third Order Cumulants (boot)
cummax Cumulative Sums, Products, etc. (base)
cummin Cumulative Sums, Products, etc. (base)
cumprod Cumulative Sums, Products, etc. (base)
cumsum Cumulative Sums, Products, etc. (base)
curve Draw Function Plots (base)
Cushings Diagnostic Tests on Patients with Cushing's Syndrome (MASS)
custest CUSUM-Test (lmtest)
cut Convert Numeric to Factor (base)
cut.dates Create a Factor from a chron or dates object (chron)
cut.default Convert Numeric to Factor (base)
cv Cross-validation criterion for nonparametric density estimation (sm)
cv.glm Cross-validation for Generalized Linear Models (boot)
cv.tree Cross-validation for Choosing Tree Complexity (tree)
Cv.warping Cross-validation for WARPing density estimation (haerdle)
Cvb.warping Biased cross-validation for WARPing density estimation (haerdle)
cycle Sampling Times of Time Series (base)
cycle.default Sampling Times of Time Series (base)
cycle.ts Sampling Times of Time Series (base)

-- D --

D Symbolic and Algorithmic Derivatives of Simple Expressions (base)
da.norm Data augmentation for incomplete multivariate normal data (norm)
daisy Dissimilarity Matrix Calculation (cluster)
DanielWood Radiated energy (NISTnls)
darwin Darwin's Plant Height Differences (boot)
data Data Sets (base)
data.class Object Classes (base)
data.entry Spreadsheet Interface for Entering Data (base)
data.frame Data Frames (base)
data.matrix Data Frame to Numeric Matrix (base)
dataentry Spreadsheet Interface for Entering Data (base)
date System Date and Time (base)
date.ddmmmyy Format a Julian date (date)
date.mdy Convert from Julian dates to month, day, and year (date)
date.mmddyy Format a Julian date (date)
date.mmddyyyy Format a Julian date (date)
dates Generate Dates and Times Components from Input (chron)
day.of.week Convert between Julian and Calendar Dates (chron)
days Return Various Periods from a Chron or Dates Object (chron)
dbeta The Beta Distribution (base)
dbetabinom The Beta Binomial Distribution (rmutil)
dbinom The Binomial Distribution (base)
dboxcox The Box-Cox Distribution (rmutil)
dburr The Burr Distribution (rmutil)
dcauchy The Cauchy Distribution (base)
dchisq The (non-central) Chi-Square Distribution (base)
ddiscrete Discrete Distribution (e1071)
ddoublebinom The Double Binomial Distribution (rmutil)
ddoublepois The Double Poisson Distribution (rmutil)
DDT DDT in Kale (MASS)
de Spreadsheet Interface for Entering Data (base)
de.ncols Spreadsheet Interface for Entering Data (base)
de.restore Spreadsheet Interface for Entering Data (base)
de.setup Spreadsheet Interface for Entering Data (base)
deaths Monthly Deaths from Lung Diseases in the UK (MASS)
debug Debug a function (base)
Defunct Defunct Functions (base)
delay Delay Evaluation (base)
delete.response Modify Terms Objects (base)
deltat Sampling Times of Time Series (base)
deltat.default Sampling Times of Time Series (base)
demo Demonstrations of R functions (base)
density Kernel Density Estimation (base)
densplot Probability density function estimate from MCMC output (coda)
deparse Expression Deparsing (base)
Deprecated Deprecated Functions (base)
deriv Symbolic and Algorithmic Derivatives of Simple Expressions (base)
deriv.default Symbolic and Algorithmic Derivatives of Simple Expressions (base)
deriv.formula Symbolic and Algorithmic Derivatives of Simple Expressions (base)
deriv.polynomial Differentiate a Polynomial (polynom)
detach Detach Objects from the Search Path (base)
dev.control Copy Graphics Between Multiple Devices (base)
dev.copy Copy Graphics Between Multiple Devices (base)
dev.cur Control Multiple Devices (base)
dev.list Control Multiple Devices (base)
dev.next Control Multiple Devices (base)
dev.off Control Multiple Devices (base)
dev.prev Control Multiple Devices (base)
dev.print Copy Graphics Between Multiple Devices (base)
dev.set Control Multiple Devices (base)
dev.xxx Control Multiple Devices (base)
dev2 Copy Graphics Between Multiple Devices (base)
dev2bitmap Copy Graphics Device to Bitmap File (base)
deviance Model Deviance (base)
deviance.comp.stable Stable Generalized Linear Regression Model (stable)
deviance.default Model Deviance (base)
deviance.fmr Fit a Generalized Nonlinear Regression Model with a Two or Three Point Mixture (gnlm)
deviance.gar Generalized autoregression (repeated)
deviance.glm Model Deviance (base)
deviance.gnlr Fit a Generalized Nonlinear Regression Model (gnlm)
deviance.gnlr3 Fit a Generalized Nonlinear Regression Model for Three Parameter Distributions (gnlm)
deviance.lm Model Deviance (base)
deviance.mlm Model Deviance (base)
deviance.nbkal Negative Binomial Model with Kalman Update (repeated)
deviance.nlr Nonlinear Regression (gnlm)
deviance.potthoff Potthoff and Roy growth curve model (growth)
deviance.stable Stable Generalized Linear Regression Model (stable)
device List of Graphical Devices (base)
Devices List of Graphical Devices (base)
dexp The Exponential Distribution (base)
df The F Distribution (base)
df.kernel Smoothing Kernel Objects (ts)
df.residual Residual Degrees-of-Freedom (base)
df.residual.fmr Fit a Generalized Nonlinear Regression Model with a Two or Three Point Mixture (gnlm)
df.residual.glm Accessing Generalized Linear Model Fits (base)
df.residual.gnlr Fit a Generalized Nonlinear Regression Model (gnlm)
df.residual.gnlr3 Fit a Generalized Nonlinear Regression Model for Three Parameter Distributions (gnlm)
df.residual.lm Accessing Linear Model Fits (base)
df.residual.nlr Nonlinear Regression (gnlm)
df.residual.stable Stable Generalized Linear Regression Model (stable)
dfbetas Regression Diagnostics (base)
dffits Regression Diagnostics (base)
dgamma The Gamma Distribution (base)
dgammacount The Gamma Count Distribution (rmutil)
dgeom The Geometric Distribution (base)
dget Write an Internal Object to a File (base)
dgextval The Generalized Extreme Value Distribution (rmutil)
dggamma The Generalized Gamma Distribution (rmutil)
dginvgauss The Generalized Inverse Gaussian Distribution (rmutil)
dglogis The Generalized Logistic Distribution (rmutil)
dgweibull The Generalized Weibull Distribution (rmutil)
dhjorth The Hjorth Distribution (rmutil)
dhyper The Hypergeometric Distribution (base)
diag Matrix Diagonals (base)
diag<- Matrix Diagonals (base)
diana Divisive Analysis (cluster)
diana.object Divisive Analysis Object (cluster)
diff Lagged Differences (base)
diff.default Lagged Differences (base)
diff.ts diff Method for ts Objects (ts)
diffeq Find Future Values of a Difference Equation (timeslab)
diffinv Discrete Integrals: Inverse of Differencing (ts)
diffinv.default Discrete Integrals: Inverse of Differencing (ts)
diffinv.ts Discrete Integrals: Inverse of Differencing (ts)
diffinv.vec Discrete Integrals: Inverse of Differencing (ts)
digamma Digamma Function (MASS)
Dim Extract Dimensions from an Object (nlme)
dim Dimensions of an Object (base)
Dim.corSpatial Dimensions of a corSpatial Object (nlme)
Dim.corStruct Dimensions of a corStruct Object (nlme)
dim.data.frame Dimensions of an Object (base)
Dim.pdCompSymm Dimensions of a pdMat Object (nlme)
Dim.pdDiag Dimensions of a pdMat Object (nlme)
Dim.pdIdent Dimensions of a pdMat Object (nlme)
Dim.pdMat Dimensions of a pdMat Object (nlme)
dim<- Dimensions of an Object (base)
dimnames Dimnames of an Object (base)
dimnames.data.frame Dimnames of an Object (base)
dimnames<- Dimnames of an Object (base)
dimnames<-.data.frame Dimnames of an Object (base)
dinvgauss The Inverse Gaussian Distribution (rmutil)
dir List the Files in a Directory/Folder (base)
dir.create File Manipulation (base)
dirname File Manipulation (base)
discoveries Numbers of Important Discoveries (base)
Discrete Discrete Distribution (e1071)
dissimilarity.object Dissimilarity Matrix Object (cluster)
dist Distance Matrix Computation (mva)
divpoly Divide Two Polynomials (timeslab)
dlaplace The Laplace Distribution (rmutil)
dlevy The Levy Distribution (rmutil)
dlnorm The Log Normal Distribution (base)
dlogis The Logistic Distribution (base)
dlogspline Logspline Density Estimation (logspline)
dmultbinom The Multiplicative Binomial Distribution (rmutil)
dmultpois The Multiplicative Poisson Distribution (rmutil)
dmvnorm The Multivariate Normal Distribution (e1071)
DNA Primate splice-junction gene sequences (DNA) (mlbench)
dnbinom The Negative Binomial Distribution (base)
dnchisq Defunct Functions (base)
dnorm The Normal Distribution (base)
do.call Execute a Function Call (base)
dof Degrees of Freedom of Wavelet (wavethresh)
dot Calculate Inner Product of Two Vectors (timeslab)
dotplot Cleveland Dot Plots (base)
double Double Precision Vectors (base)
Double Binomial The Double Binomial Distribution (rmutil)
Double Poisson The Double Poisson Distribution (rmutil)
download.file Download Packages from CRAN (base)
download.packages Download Packages from CRAN (base)
downs.bc Incidence of Down's Syndrome in British Columbia (boot)
dpareto The Pareto Distribution (rmutil)
dpih Select a Histogram Bin Width (KernSmooth)
dpik Select a Bandwidth for Kernel Density Estimation (KernSmooth)
dpill Select a Bandwidth for Local Linear Regression (KernSmooth)
dpois The Poisson Distribution (base)
dpowexp The power exponential Distribution (rmutil)
dput Write an Internal Object to a File (base)
draw Draw Wavelets - Generic function (wavethresh)
draw.default Draw a Picture of a Wavelet (wavethresh)
draw.imwd Draw Wavelet Corresponding to Wavelet Object (wavethresh)
draw.imwdc Draw Wavelet Corresponding to Wavelet Object (wavethresh)
draw.wd Draw Wavelet Corresponding to Wavelet Object (wavethresh)
drivers Deaths of Car Drivers in Great Britain 1969-84 (MASS)
drop Drop Redundant Extent Information (base)
drop.scope Compute Allowed Changes in Adding to or Dropping from a Formula (base)
drop.terms Modify Terms Objects (base)
drop1 Add or Drop All Possible Single Terms to a Model (base)
drop1.default Add or Drop All Possible Single Terms to a Model (base)
drop1.glm Add or Drop All Possible Single Terms to a Model (base)
drop1.lm Add or Drop All Possible Single Terms to a Model (base)
drop1.mlm Add or Drop All Possible Single Terms to a Model (base)
dropterm Try All One-Term Deletions from a Model (MASS)
dsignrank Distribution of the Wilcoxon Signed Rank Statistic (base)
dstable The Stable Distribution (stable)
dt The Student t Distribution (base)
dtarma Calculate Exact ARMA MLE's (timeslab)
ducks Behavioral and Plumage Characteristics of Hybrid Ducks (boot)
dummy.coef Extract Coefficients in Original Coding (base)
dummy.coef.aovlist Extract Coefficients in Original Coding (base)
dummy.coef.lm Extract Coefficients in Original Coding (base)
dump Text Representations of R Objects (base)
dunif The Uniform Distribution (base)
duplicated Determine Duplicate Elements (base)
dweibull The Weibull Distribution (base)
dwilcox Distribution of the Wilcoxon Rank Sum Statistic (base)
dwtest Durbin-Watson-Test (lmtest)
dyn.load Foreign Function Interface (base)
dyn.unload Foreign Function Interface (base)
dynload Foreign Function Interface (base)

-- E --

eagles Foraging Ecology of Bald Eagles (MASS)
ecdf Empirical Cumulative Distribution Function (stepfun)
Eckerle4 Circular interference data (NISTnls)
edit Invoke a Text Editor (base)
eff.aovlist Compute Efficiencies of Multistratum Analysis of Variance (base)
effects Effects from Fitted Model (base)
effects.glm Effects from Fitted Model (base)
effects.lm Effects from Fitted Model (base)
ehr Fit an Intensity Function to Event Histories (event)
eigen Spectral Decomposition of a Matrix (base)
element Extract Elements of an Array (e1071)
elliptic Multivariate elliptically-contoured and Student t repeated measurements models for linear and nonlinear changes over time in the presence of time-varying covariates and with AR(1) and two levels of variance components (growth)
else Control Flow (base)
em.norm EM algorithm for incomplete normal data (norm)
emacs Invoke a Text Editor (base)
embed Embedding a Time Series (ts)
emclust BIC from hierarchical clustering followed by EM for several parameterized Gaussian mixture models. (mclust)
emclust1 BIC from hierarchical clustering followed by EM for a parameterized Gaussian mixture model. (mclust)
empinf Empirical Influence Values (boot)
encode general encoding for classification (snns)
end Encode the Terminal Times of Time Series (base)
end.default Encode the Terminal Times of Time Series (base)
ENSO Atmospheric pressure differences (NISTnls)
envelope Confidence Envelopes for Curves (boot)
environment Environment Access (base)
environment<- Environment Access (base)
eqscplot Plots with Geometrically Equal Scales (MASS)
erase.screen Creating and Controlling Multiple Screens on a Single Device (base)
error.nn.pattern Output error of an NN (snns)
esoph Smoking, Alcohol and (O)esophageal Cancer (base)
est.variogram Variogram Estimator (sgeostat)
estep E-step for parameterized MVN mixture models (mclust)
estep.EEE E-step for constant-variance MVN mixture models (mclust)
estep.EI E-step for spherical, constant-volume MVN mixture models (mclust)
estep.VI E-step for spherical, varying volume MVN mixture models (mclust)
estep.VVV E-step for constant-variance MVN mixture models (mclust)
estep.XEV E-step for constant shape MVN mixture models (mclust)
ethanol Exhaust emissions (locfit)
euro Euro Conversion Rates (base)
euro.cross Euro Conversion Rates (base)
eurodist Distances Between Cities in Europe (base)
EuStockMarkets Daily Closing Prices of Major European Stock Indices, 1991-1998. (ts)
eval Evaluate an (Unevaluated) Expression (base)
eval.parent Evaluate an (Unevaluated) Expression (base)
evalq Evaluate an (Unevaluated) Expression (base)
event Event History Analysis Library (event)
example Run an Examples Section from the Online Help (base)
exists Is an Object Defined? (base)
exp Logarithms and Exponentials (base)
exp.tilt Exponential Tilting (boot)
expand.grid Create a Data Frame from All Combinations of Factors (base)
expcov Spatial Covariance Functions (spatial)
Exponential The Exponential Distribution (base)
expression Unevaluated Expressions (base)
Extract Extract or Replace Parts of an Object (base)
extractAIC Choose a model by AIC in a Stepwise Algorithm (MASS)
extractAIC.aov Extract AIC from a Fitted Model (base)
extractAIC.coxph Extract AIC from a Fitted Model (base)
extractAIC.glm Extract AIC from a Fitted Model (base)
extractAIC.lm Extract AIC from a Fitted Model (base)
extractAIC.negbin Extract AIC from a Fitted Model (base)
extractAIC.survreg Extract AIC from a Fitted Model (base)
Extremes Maxima and Minima (base)

-- F --

F Logical Vectors (base)
factor Factors (base)
factor.scope Compute Allowed Changes in Adding to or Dropping from a Formula (base)
faithful Old Faithful Geyser Data (base)
FALSE Logical Vectors (base)
family Family Objects for Models (base)
family.glm Accessing Generalized Linear Model Fits (base)
family.lm Accessing Linear Model Fits (base)
fanny Fuzzy Analysis (cluster)
fanny.object Fuzzy Analysis Object (cluster)
farms Ecological Factors in Farm Management (MASS)
fda Flexible Discriminant Analysis (mda)
fdeaths Monthly Deaths from Lung Diseases in the UK (MASS)
FDist The F Distribution (base)
fft Fast Discrete Fourier Transform (base)
fgl Measurements of Forensic Glass Fragments (MASS)
file File Manipulation (base)
file.append File Manipulation (base)
file.choose Choose a File Interactively (base)
file.create File Manipulation (base)
file.exists File Manipulation (base)
file.path Construct Path to File (base)
file.remove File Manipulation (base)
file.show Display One or More Files (base)
filled.contour Level (Contour) Plots (base)
filt Apply a Linear Filter to a Vector (timeslab)
filter Linear Filtering on a Time Series (ts)
filter.select Wavelet Filter Coefficients (wavethresh)
find Find Objects by (Partial) Name (base)
find.classes find classes of NN output (snns)
find.classes.nn.pattern (x, byname=FALSE, method="WTA", low=0, high=0) find classes of NN output (snns)
finterp Formula interpreter (rmutil)
fir Counts of Balsam-fir Seedlings (boot)
first.last Build a first/last database for wavelet transforms (wavethresh)
fisher.test Fisher's Exact Test for Count Data (ctest)
fit.dist Fit a Probability Distribution to Frequency Data (gnlm)
fit.exponential Variogram Model Fit (sgeostat)
fit.gaussian Variogram Model Fit (sgeostat)
fit.linear Variogram Model Fit (sgeostat)
fit.spherical Variogram Model Fit (sgeostat)
fit.variogram Variogram Model Fit (sgeostat)
fit.wave Variogram Model Fit (sgeostat)
fitted Extract Model Fitted Values (base)
fitted.default Extract Model Fitted Values (base)
fitted.gar Generalized autoregression (repeated)
fitted.garch Fit GARCH Models to Time Series (tseries)
fitted.glm Extract Model Fitted Values (base)
fitted.gls Extract gls Fitted Values (nlme)
fitted.glsStruct Calculate glsStruct Fitted Values (nlme)
fitted.gnls Extract gnls Fitted Values (nlme)
fitted.gnlsStruct Calculate gnlsStruct Fitted Values (nlme)
fitted.lm Extract Model Fitted Values (base)
fitted.lme Extract lme Fitted Values (nlme)
fitted.lmeStruct Calculate lmeStruct Fitted Values (nlme)
fitted.lmList Extract lmList Fitted Values (nlme)
fitted.locfit Fitted values for a `"locfit"' object. (locfit)
fitted.nbkal Negative Binomial Model with Kalman Update (repeated)
fitted.nlmeStruct Calculate nlmeStruct Fitted Values (nlme)
fitted.nls Nonlinear Least Squares (nls)
fitted.tukeyline Robust Line Fitting (eda)
fitted.values Extract Model Fitted Values (base)
fitted.values.fmr Fit a Generalized Nonlinear Regression Model with a Two or Three Point Mixture (gnlm)
fitted.values.glm Accessing Generalized Linear Model Fits (base)
fitted.values.gnlr Fit a Generalized Nonlinear Regression Model (gnlm)
fitted.values.gnlr3 Fit a Generalized Nonlinear Regression Model for Three Parameter Distributions (gnlm)
fitted.values.lm Accessing Linear Model Fits (base)
fitted.values.nlr Nonlinear Regression (gnlm)
fitted.values.stable Stable Generalized Linear Regression Model (stable)
fitted.values.tukeyline Robust Line Fitting (eda)
fivenum Tukey Five-Number Summaries (base)
fix Fix an Object (base)
fixed.effects Extract Fixed Effects (nlme)
fixed.effects.lme Extract lme Fixed Effects (nlme)
fixed.effects.lmList Extract lmList Fixed Effects (nlme)
fixef Extract Fixed Effects (nlme)
fixef.lme Extract lme Fixed Effects (nlme)
fixef.lmList Extract lmList Fixed Effects (nlme)
flame Response surface for a intensity Results from an analytical chemistry lab at NCSU. The intensity of emitted light when a solution with Lithium is ionized in a flame. The two independent variables are the fuel and O2 flow rates for the flame. The goal is to identify flow rates that maximize the intensity. The ridge in this surface may be due to stoichiometric ratio of how the fuel and the oxygen combine to burn. A maxima is located near the edge of the operating region but it was found that for setting of flow rates outside the experimental region the mixture tended to explode! Data was generously provided by Charles Boss and Kevin Buckley. (funfits)
floor Rounding of Numbers (base)
flou Fuzzy Coding (3-Way) (multiv)
flower Flower Characteristics (cluster)
fmr Fit a Generalized Nonlinear Regression Model with a Two or Three Point Mixture (gnlm)
fnenvir Check covariates and parameters of a function (rmutil)
for Control Flow (base)
forbes Forbes' Data on Boiling Points in the Alps (MASS)
Foreign Foreign Function Interface (base)
Formaldehyde Determination of Formaldehyde (base)
formals Access to and Manipulation of the Formal Arguments (base)
formals<- Access to and Manipulation of the Formal Arguments (base)
format Encode in a Common Format (base)
format.char Flexible Formatting (base)
format.default Encode in a Common Format (base)
format.info format(.) Information (base)
format.pval Encode in a Common Format (base)
formatC Flexible Formatting (base)
formula Model Formulae (base)
formula.corStruct Extract corStruct Object Formula (nlme)
formula.data.frame Model Formulae (base)
formula.default Model Formulae (base)
formula.formula Model Formulae (base)
formula.gls Extract gls Object Formula (nlme)
formula.gnls Extract gnls Object Formula (nlme)
formula.groupedData Extract groupedData Formula (nlme)
formula.lm Accessing Linear Model Fits (base)
formula.lme Extract lme Object Formula (nlme)
formula.lmList Extract lmList Object Formula (nlme)
formula.modelStruct Extract modelStruct Object Formula (nlme)
formula.nlme Extract nlme Object Formula (nlme)
formula.nls Extract Model Formula from nls Object (nlme)
formula.nlsList Extract nlsList Object Formula (nlme)
formula.pdBlocked Extract pdBlocked Formula (nlme)
formula.pdMat Extract pdMat Formula (nlme)
formula.reStruct Extract reStruct Object Formula (nlme)
formula.terms Model Formulae (base)
formula.varComb Extract varFunc Formula (nlme)
formula.varFunc Extract varFunc Formula (nlme)
forwardsolve Solve an Upper or Lower Triangular System (base)
fracdiff fracdiff: Maximum likelihood parameter estimates for (fracdiff)
fracdiff.sim fracdiff.sim: test problem generator for fracdiff (fracdiff)
fracdiff.var Recompute Covariance Estimate for fracdiff (fracdiff)
fractions Rational Approximations to in Fraction Form (rational)
frailty (Approximate) Frailty models (survival5)
frailty.gamma (Approximate) Frailty models (survival5)
frailty.gaussian (Approximate) Frailty models (survival5)
frailty.t (Approximate) Frailty models (survival5)
frame Create / Start a New Plot Frame (base)
freeny Freeny's Revenue Data (base)
freq.array Bootstrap Frequency Arrays (boot)
freqs Form Vector of Natural (Nyquist) Frequencies (timeslab)
frequency Sampling Times of Time Series (base)
frequency.default Sampling Times of Time Series (base)
frequency.polygon Plots frequency polygon (haerdle)
frets Head Dimensions in Brothers (boot)
friedman.test Friedman Rank Sum Test (ctest)
function Function Definition (base)

-- G --

G.Warpingreg Cross-validation for WARPing regression (haerdle)
GAGurine Level of GAG in Urine of Children (MASS)
galaxies Velocities for 82 Galaxies (MASS)
Gamma Family Objects for Models (base)
gamma Special Functions of Mathematics (base)
Gamma Count The Gamma Count Distribution (rmutil)
gamma.dispersion Calculate the MLE of the Gamma Dispersion Parameter in a GLM Fit (MASS)
gamma.shape.glm Estimate the Shape Parameter of the Gamma Distribution in a GLM Fit (MASS)
gammaCody Bessel Functions (base)
GammaDist The Gamma Distribution (base)
gapply Apply a Function by Groups (nlme)
gar Generalized autoregression (repeated)
garch Fit GARCH Models to Time Series (tseries)
gaucov Spatial Covariance Functions (spatial)
gauss.hermite Calculate Gauss-Hermite Quadrature Points (rmutil)
Gauss1 Generated data (NISTnls)
Gauss2 Generated data (NISTnls)
Gauss3 Generated data (NISTnls)
gaussian Family Objects for Models (base)
gc Garbage Collection (base)
gcinfo Garbage Collection (base)
gctorture Torture Garbage Collector (base)
gee Function to solve a Generalized Estimation Equation Model (gee)
gehan Remission Times of Leukaemia Patients (MASS)
gelman.diag Gelman and Rubin's diagnostic (coda)
gelman.plot Gelman-Rubin-Brooks plot (coda)
gen.ridge Perform a penalized regression, as used by pda() (mda)
Generalized Extreme Value The Generalized Extreme Value Distribution (rmutil)
Generalized Gamma The Generalized Gamma Distribution (rmutil)
Generalized Inverse Gaussian The Generalized Inverse Gaussian Distribution (rmutil)
Generalized Logistic The Generalized Logistic Distribution (rmutil)
Generalized Weibull The Generalized Weibull Distribution (rmutil)
genotype The Rat Genotype Data (Rnotes)
Geometric The Geometric Distribution (base)
get Return a Variable's Value (base)
get.hist.quote Download Historical Finance Data (tseries)
get.lam Projection Index (princurve)
getCovariate Extract Covariate from an Object (nlme)
getCovariate.corSpatial Extract corStruct Object Covariate (nlme)
getCovariate.corStruct Extract corStruct Object Covariate (nlme)
getCovariate.data.frame Extract Data Frame Covariate (nlme)
getCovariate.varFunc Extract varFunc Covariate (nlme)
getCovariateFormula Extract Covariates Formula (nlme)
getData Extract Data from an Object (nlme)
getData.gls Extract gls Object Data (nlme)
getData.lme Extract lme Object Data (nlme)
getData.lmList Extract lmList Object Data (nlme)
getenv Get Environment Variables (base)
getGroups Extract Grouping Factors from an Object (nlme)
getGroups.corStruct Extract corStruct Groups (nlme)
getGroups.data.frame Extract Groups from a Data Frame (nlme)
getGroups.gls Extract gls Object Groups (nlme)
getGroups.lme Extract lme Object Groups (nlme)
getGroups.lmList Extract lmList Object Groups (nlme)
getGroups.varFunc Extract varFunc Groups (nlme)
getGroupsFormula Extract Grouping Formula (nlme)
getGroupsFormula.default Extract Grouping Formula (nlme)
getGroupsFormula.gls Extract gls Object Grouping Formula (nlme)
getGroupsFormula.lme Extract lme Object Grouping Formula (nlme)
getGroupsFormula.lmList Extract lmList Object Grouping Formula (nlme)
getGroupsFormula.reStruct Extract reStruct Grouping Formula (nlme)
getInitial Get Initial Parameter Estimates (nls)
getInitial.default Get Initial Parameter Estimates (nls)
getInitial.formula Get Initial Parameter Estimates (nls)
getInitial.selfStart Get Initial Parameter Estimates (nls)
getparam.norm Extract normal parameters from packed storage (norm)
getResponse Extract Response Variable from an Object (nlme)
getResponse.data.frame Extract Response from a Data Frame (nlme)
getResponse.gls Extract gls Object Response (nlme)
getResponse.lme Extract lme Object Response (nlme)
getResponse.lmList Extract lmList Object Response (nlme)
getResponseFormula Extract Formula Specifying Response Variable (nlme)
gettvc Find the most recent value of a time-varying covariate before each observed response and possibly add them to a list of other time-varying covariates. (rmutil)
getwd Get or Set Working Directory (base)
geweke.diag Geweke's convergence diagnostic for Markov chains (coda)
geweke.plot Geweke-Brooks plot (coda)
geyser Old Faithful Geyser Dataset (locfit)
gilgais Line Transect of Soil in Gilgai Territory (MASS)
ginv Generalized Inverse of a Matrix (MASS)
gl Generate Factor Levels (base)
Glass Glass Identification Database (mlbench)
glass Glass Identification Database (mda)
glm Fitting Generalized Linear Models (base)
glm.control Fitting Generalized Linear Models (base)
glm.convert Change a Negative Binomial fit to a GLM fit (MASS)
glm.diag Generalized Linear Model Diagnostics (boot)
glm.diag.plots Diagnostics plots for generalized linear models (boot)
glm.fit Fitting Generalized Linear Models (base)
glm.fit.null Fitting Generalized Linear Models (base)
glm.nb Fit a Negative Binomial Generalized Linear Model (MASS)
glm.summaries Accessing Generalized Linear Model Fits (base)
glmm Generalized Linear Mixed Models (repeated)
globalenv Environment Access (base)
gls Fit Linear Model Using Generalized Least Squares (nlme)
glsControl Control Values for gls Fit (nlme)
glsObject Fitted gls Object (nlme)
glsStruct Generalized Least Squares Structure (nlme)
gnlm Generalized Nonlinear Regression Library (gnlm)
gnlmm Fit a Generalized Nonlinear Mixed Model (repeated)
gnlr Fit a Generalized Nonlinear Regression Model (gnlm)
gnlr3 Fit a Generalized Nonlinear Regression Model for Three Parameter Distributions (gnlm)
gnls Fit Nonlinear Model Using Generalized Least Squares (nlme)
gnlsControl Control Values for gnls Fit (nlme)
gnlsObject Fitted gnls Object (nlme)
gnlsStruct Generalized Nonlinear Least Squares Structure (nlme)
GNOME GNOME Desktop Graphics Device (base)
Gnome GNOME Desktop Graphics Device (base)
gnome GNOME Desktop Graphics Device (base)
gqtest Goldfeld-Quandt-Test (lmtest)
graphics.off Control Multiple Devices (base)
grav Acceleration Due to Gravity (boot)
gravity Acceleration Due to Gravity (boot)
gray Gray Level Specification (base)
grep Pattern Matching and Replacement (base)
grid Add Grid to a Plot (base)
groupedData Construct a groupedData Object (nlme)
growth Normal Theory Repeated Measurements Library (growth)
GS.Warping Golden section bootstrap for WARPing regression (haerdle)
gssanova Fitting Smoothing Spline ANOVA Models with Non Gaussian Responses (gss)
gsub Pattern Matching and Replacement (base)
gsummary Summarize by Groups (nlme)

-- H --

Hahn1 Thermal expansion data (NISTnls)
HairEyeColor Hair and Eye Color of Statistics Students (base)
hamming.distance Hamming Distances of Vectors (e1071)
hamming.window Computes the Coefficients of a Hamming Window. (e1071)
hanning.window Computes the Coefficients of a Hanning Window. (e1071)
hardcl Convex Clustering (cclust)
harvtest Harvey-Collier-Test (lmtest)
hasTsp Tsp Attribute of Time-Series-like Objects (base)
hat Regression Diagnostics (base)
hatmatrix Weight diagrams and the hat matrix for a local regression model. (locfit)
hboxcox The Box-Cox Distribution (rmutil)
hburr The Burr Distribution (rmutil)
hcauchy Hazard Function for a Cauchy Process (event)
hclust Hierarchical Clustering (mva)
hcv Cross-validatory choice of smoothing parameter (sm)
hdf5 Interface to the HDF5 Library (base)
hdf5load Interface to the HDF5 Library (base)
hdf5save Interface to the HDF5 Library (base)
heart Stanford Heart Transplant data (survival5)
heat.colors Color Palettes (base)
heidel.diag Heidelberger and Welch's convergence diagnostic (coda)
help Documentation (base)
help.search Search the Help System (base)
help.start Hypertext Documentation (base)
hexp Hazard Function for a Poisson Process (event)
hgamma Hazard Function for a Gamma Process (event)
hgextval The Generalized Extreme Value Distribution (rmutil)
hggamma The Generalized Gamma Distribution (rmutil)
hglogis The Generalized Logistic Distribution (rmutil)
hgweibull The Generalized Weibull Distribution (rmutil)
hhjorth The Hjorth Distribution (rmutil)
hidden Hidden Markov Chain Models (repeated)
hierclust Hierarchical Clustering (multiv)
hills Record Times in Scottish Hill Races (MASS)
hinvgauss The Inverse Gaussian Distribution (rmutil)
hirose Failure Time of PET Film (boot)
hist Histograms (base)
hist.default Histograms (base)
histogram Haerdle's histogram function (haerdle)
histogram.normal.ref histogram with automatic binwidth (haerdle)
Hjorth The Hjorth Distribution (rmutil)
hlaplace The Laplace Distribution (rmutil)
hlnorm Hazard Function for a Log Normal Process (event)
hlogis Hazard Function for a Logistic Process (event)
hmctest Harrison-McCabe-Test (lmtest)
hnorm Normal optimal choice of smoothing parameter in density estimation (sm)
hours Return Hours, Minutes, or Seconds from a Times Object (chron)
house The Tuggeranong House Price Data (Rnotes)
HouseVotes84 United States Congressional Voting Records 1984 (mlbench)
housing Frequency Table from a Copenhagen Housing Conditions Survey. (MASS)
hpareto The Pareto Distribution (rmutil)
hsj Sheather-Jones choice of smoothing parameter for density estimation (sm)
hstable The Stable Distribution (stable)
hstudent Hazard Function for a Student t Process (event)
hsv HSV Color Specification (base)
huber Huber M-estimator of Location with MAD Scale (MASS)
hubers Huber "proposal 2" Robust Estimator of Location and/or Scale (MASS)
hweibull Hazard Function for a Weibull Process (event)
Hyperbolic Hyperbolic Functions (base)
Hypergeometric The Hypergeometric Distribution (base)

-- I --

I Model Formulae (base)
ica Independent Component Analysis (e1071)
ident Create an Individual Identification Vector for a Point Process (event)
identify Identify Points in a Scatter Plot (base)
identify.default Identify Points in a Scatter Plot (base)
identify.point Identify points on a Point Object (sgeostat)
identify.tri Identify points in a triangulation plot (tripack)
if Control Flow (base)
ifelse Conditional Element Selection (base)
Im Complex Vectors (base)
image Display a Color Image (base)
immer Yields from a Barley Field Trial (MASS)
Imp.Estimates Importance Sampling Estimates (boot)
imp.moments Importance Sampling Estimates (boot)
imp.norm Impute missing multivariate normal data (norm)
imp.prob Importance Sampling Estimates (boot)
imp.quantile Importance Sampling Estimates (boot)
imp.weights Importance Sampling Weights. (boot)
imwd 2D Discrete Wavelet Transform (Image W. Decomposition) (wavethresh)
imwd.object 2d Wavelet Decomposition Object (wavethresh)
imwdc.object Compressed 2D wavelet decomposition object (wavethresh)
imwr 2D Inverse Discrete Wavelet Transform (Image W. Reconstruction) (wavethresh)
imwr.imwd 2D Inverse Discrete Wavelet Transform (Image W. Reconstruction) (wavethresh)
imwr.imwdc 2D Inverse Discrete Wavelet Transform (Image W. Reconstruction) (wavethresh)
in.convex.hull Determines if points are in the convex hull of a triangulation object (tripack)
index.search Search Indices for Help Files (base)
Inf Finite, Infinite and NaN Numbers (base)
infert Infertility after Spontaneous and Induced Abortion (base)
influence.measures Regression Diagnostics (base)
infqnt Plot Informative Quantile Function of a Data Set (timeslab)
inherits Object Classes (base)
initialize Initialize Object (nlme)
initialize.corAR1 Initialize corStruct Object (nlme)
initialize.corARMA Initialize corStruct Object (nlme)
initialize.corCAR1 Initialize corStruct Object (nlme)
initialize.corCompSymm Initialize corStruct Object (nlme)
initialize.corHF Initialize corStruct Object (nlme)
initialize.corIdent Initialize corStruct Object (nlme)
initialize.corLin Initialize corStruct Object (nlme)
initialize.corSpatial Initialize corStruct Object (nlme)
initialize.corSpher Initialize corStruct Object (nlme)
initialize.corStruct Initialize corStruct Object (nlme)
initialize.corSymm Initialize corStruct Object (nlme)
initialize.glsStruct Initialize a glsStruct Object (nlme)
initialize.lmeStruct Initialize an lmeStruct Object (nlme)
initialize.reStruct Initialize reStruct Object (nlme)
initialize.varComb Initialize varFunc Object (nlme)
initialize.varConstPower Initialize varFunc Object (nlme)
initialize.varExp Initialize varFunc Object (nlme)
initialize.varFixed Initialize varFunc Object (nlme)
initialize.varFunc Initialize varFunc Object (nlme)
initialize.varIdent Initialize varFunc Object (nlme)
initialize.varPower Initialize varFunc Object (nlme)
InsectSprays Effectiveness of Insect Sprays (base)
INSTALL Install Add-on Packages (base)
install.packages Download Packages from CRAN (base)
installed.packages Download Packages from CRAN (base)
Insurance Numbers of Car Insurance claims (MASS)
int Numerical Integration of a Function (rmutil)
integer Integer Vectors (base)
integral Integrate a Polynomial (polynom)
integral.polynomial Integrate a Polynomial (polynom)
integrate Adaptive Integration in 1--20 Dimensions. (integrate)
interaction Compute Factor Interactions (base)
interactive Is R Running Interactively? (base)
Internal Call an Internal Function (base)
interp Gridded Bivariate Interpolation for Irregular Data (akima)
interp.new Gridded Bivariate Interpolation for Irregular Data (akima)
interp.old Gridded Bivariate Interpolation for Irregular Data (akima)
interpolate Interpolate Values of Array (e1071)
interpp Pointwise Bivariate Interpolation for Irregular Data (akima)
interpp.new Pointwise Bivariate Interpolation for Irregular Data (akima)
interpp.old Pointwise Bivariate Interpolation for Irregular Data (akima)
interpSpline Create an Interpolation Spline (splines)
interpSpline.default Create an Interpolation Spline (splines)
interpSpline.formula Create an Interpolation Spline (splines)
intersect Set Operations (base)
intervals Confidence Intervals on Coefficients (nlme)
intervals.gls Confidence Intervals on gls Parameters (nlme)
intervals.lme Confidence Intervals on lme Parameters (nlme)
intervals.lmList Confidence Intervals on lmList Coefficients (nlme)
inv.logit Inverse Logit Function (boot)
Inverse Gaussian The Inverse Gaussian Distribution (rmutil)
inverse.gaussian Family Objects for Models (base)
invisible Change the Print Mode to Invisible (base)
Ionosphere Johns Hopkins University Ionosphere database (mlbench)
iowheat The Iowa Wheat Yield Data (Rnotes)
iprofile Produce Individual Time Profiles for Plotting (rmutil)
IQR The Interquartile Range (base)
iris Fisher's Iris Data (subset) (locfit)
iris3 Edgar Anderson's Iris Data (base)
is.array Multi-way Arrays (base)
is.atomic Is an Object Atomic or Recursive? (base)
is.call Function Calls (base)
is.character Character Vectors (base)
is.complex Complex Vectors (base)
is.data.frame Data Frames (base)
is.date Date Objects (date)
is.double Double Precision Vectors (base)
is.element Set Operations (base)
is.empty.model Check if a Model is Empty (base)
is.environment Environment Access (base)
is.expression Unevaluated Expressions (base)
is.factor Factors (base)
is.finite Finite, Infinite and NaN Numbers (base)
is.function Is an Object of Type Function? (base)
is.holiday Find Weekends and Holidays in a Chron or Dates Object (chron)
is.infinite Finite, Infinite and NaN Numbers (base)
is.integer Integer Vectors (base)
is.language Is an Object a Language Object? (base)
is.list Lists -- Generic and Dotted Pairs (base)
is.loaded Foreign Function Interface (base)
is.logical Logical Vectors (base)
is.matrix Matrices (base)
is.mcmc Markov Chain Monte Carlo Objects (coda)
is.mcmc.list Replicated Markov Chain Monte Carlo Objects (coda)
is.mts Internal ts functions (ts)
is.na Not Available / ``Missing'' Values (base)
is.na.data.frame Not Available / ``Missing'' Values (base)
is.name Variable Names (base)
is.nan Finite, Infinite and NaN Numbers (base)
is.null The Null Object (base)
is.numeric Numeric Vectors (base)
is.object Is an Object ``internally classed''? (base)
is.ordered Factors (base)
is.pairlist Lists -- Generic and Dotted Pairs (base)
is.polymars test for polymars objects (polymars)
is.polynomial Polynomials (polynom)
is.qr The QR Decomposition of a Matrix (base)
is.R Are we using R, rather than S? (base)
is.ratetable Verify that an Object is of Class `ratetable' (survival5)
is.real Real Vectors (base)
is.recursive Is an Object Atomic or Recursive? (base)
is.single Is an Object of Single Precision Type? (base)
is.stepfun Step Functions (stepfun)
is.Surv Create a Survival Object (survival5)
is.ts Time-Series Objects (base)
is.tskernel Smoothing Kernel Objects (ts)
is.vector Vectors (base)
is.weekend Find Weekends and Holidays in a Chron or Dates Object (chron)
isBalanced Check a Design for Balance (nlme)
isBalanced.groupedData Check a Design for Balance (nlme)
isInitialized Check if Object is Initialized (nlme)
isInitialized.pdBlocked Check if Object is Initialized (nlme)
isInitialized.pdMat Check if Object is Initialized (nlme)
isInitialized.reStruct Check if an reStruct Object is Initialized (nlme)
islands Areas of the World's Major Landmasses (base)
islay Jura Quartzite Azimuths on Islay (boot)
isoMDS Kruskal's Non-metric Multidimensional Scaling (MASS)

-- J --

jack.after.boot Jackknife-after-Bootstrap Plots (boot)
jackknife Jackknife Estimation (bootstrap)
janka The Janka hardness data (Rnotes)
jarque.bera.test Jarque-Bera Test (tseries)
jasa1 Stanford Heart Transplant data (survival5)
jcity Location of 49 Japanese Cities (jpn)
jellyfish The Jellyfish Data (Rnotes)
jitter Add `Jitter' (Noise) to Numbers (base)
jpn Plot Japan's Coast Line and Prefectures (jpn)
jpn.b Blocking Information of Japanese Coast Lines and Prefecture Boundaries (jpn)
jpn.x Longitudes of Japanese Coast Lines and Prefecture Boundaries (jpn)
jpn.y Latitudes of Japanese Coast Lines and Prefecture Boundaries (jpn)
julian Convert between Julian and Calendar Dates (chron)

-- K --

k.nn k-nearest neighbour non-parametric regression (haerdle)
k3.linear Linear Skewness Estimate (boot)
kalcount Repeated Measurements Models for Counts in the Presence of Time-varying Covariates and with Frailty or Serial Dependence (repeated)
kalseries Repeated Measurements Models for Continuous Variables in the Presence of Time-varying Covariates and with Frailty or Serial Dependence (repeated)
kalsurv Repeated Events Models for Changes over Time in the Presence of Time-varying Covariates and with Frailty or Various Types of Serial Dependence (event)
kalythos The Kalythos Blindness Data (Rnotes)
kappa Estimate the Condition Number (base)
kappa.default Estimate the Condition Number (base)
kappa.lm Estimate the Condition Number (base)
kappa.qr Estimate the Condition Number (base)
kappa.tri Estimate the Condition Number (base)
Kaver Average K-functions from Simulations (spatial)
kde kernel density estimation (haerdle)
kde2d Two-Dimensional Kernel Density Estimation (MASS)
kds.ci Confidence intervals for kernel density estimates (haerdle)
Kenvl Compute Envelope and Average of Simulations of K-fns (spatial)
kernapply Apply Smoothing Kernel (ts)
kernapply.default Apply Smoothing Kernel (ts)
kernapply.ts Apply Smoothing Kernel (ts)
kernapply.tskernel Apply Smoothing Kernel (ts)
kernapply.vector Apply Smoothing Kernel (ts)
kernel Smoothing Kernel Objects (ts)
Kfn Compute K-fn of a Point Pattern (spatial)
kidney Kidney data from survival5 (survival5)
Kirby2 Microscope line width standards (NISTnls)
km Kaplan-Meier Survival Curves (event)
kmeans Convex Clustering (cclust)
knn k-Nearest Neighbour Classification (class)
knn.cv k-Nearest Neighbour Cross-Validatory Classification (class)
knn1 1-nearest neighbour classification (class)
knots Step Functions (stepfun)
knots.stepfun Step Functions (stepfun)
krig Kriging surface estimate (funfits)
krige Kriging (sgeostat)
kronecker Kronecker Product of Arrays (base)
kruskal.test Kruskal-Wallis Rank Sum Test (ctest)
ks.test Kolmogorov-Smirnov Tests (ctest)
ksmooth Kernel Regression Smoother (modreg)
kurtosis Kurtosis (e1071)

-- L --

labels Find Labels from Object (base)
labels.default Find Labels from Object (base)
labels.lm Find Labels from Object (base)
labels.rpart Create Split Labels For an Rpart Object (rpart)
labels.terms Find Labels from Object (base)
lag Lag a Time Series (ts)
lag.default Lag a Time Series (ts)
lagplot Lag Scatter Plot (sgeostat)
LakeHuron Level of Lake Huron 1875-1972 (ts)
Lanczos1 Generated data (NISTnls)
Lanczos2 Generated data (NISTnls)
Lanczos3 Generated data (NISTnls)
Laplace The Laplace Distribution (rmutil)
lapply Apply a Function over a List or Vector (base)
laser Bellcore Experimental Laser Data (xgobi)
Last.value Value of Last Evaluated Expression (base)
layout Specifying Complex Plot Arrangements (base)
layout.show Specifying Complex Plot Arrangements (base)
lbeta Special Functions of Mathematics (base)
lchoose Special Functions of Mathematics (base)
lcm Specifying Complex Plot Arrangements (base)
lda Linear Discriminant Analysis (MASS)
ldahist Histograms or Density Plots of Multiple Groups (MASS)
ldeaths Monthly Deaths from Lung Diseases in the UK (ts)
leap.year Convert between Julian and Calendar Dates (chron)
leaps all-subsets regressiom (leaps)
leaps.backward Internal functions for leaps(), subsets() (leaps)
leaps.exhaustive Internal functions for leaps(), subsets() (leaps)
leaps.forward Internal functions for leaps(), subsets() (leaps)
leaps.seqrep Internal functions for leaps(), subsets() (leaps)
leaps.setup Internal functions for leaps(), subsets() (leaps)
legend Add Legends to Plots (base)
length Length of a Vector or List (base)
length<- Length of a Vector or List (base)
lennon Image of John Lennon (wavethresh)
LetterRecognition Letter Image Recognition Data (mlbench)
LETTERS Built-in Constants (base)
letters Built-in Constants (base)
leuk Survival Times and White Blood Counts for Leukaemia Patients (boot)
leukemia Acute Myelogenous Leukemia survival data (survival5)
levels Levels Attributes (base)
levels.factor Factor Levels Assignment (base)
levels<- Levels Attributes (base)
levels<-.default Levels Attributes (base)
levels<-.factor Factor Levels Assignment (base)
Levy The Levy Distribution (rmutil)
lgamma Special Functions of Mathematics (base)
lh Luteinizing Hormone in Blood Samples (MASS)
library Loading and Listing of Packages (base)
library.dynam Loading Shared Libraries (base)
licence The R License Terms (base)
license The R License Terms (base)
LifeCycleSavings Intercountry Life-Cycle Savings Data (base)
line Robust Line Fitting (eda)
linear.approx Linear Approximation of Bootstrap Replicates (boot)
lines Add Connected Line Segments to a Plot (base)
lines.default Add Connected Line Segments to a Plot (base)
lines.locfit Add `locfit' line to existing plot (locfit)
lines.polynomial Lines Method for Polynomials (polynom)
lines.saddle.distn Add a Saddlepoint Approximation to a Plot (boot)
lines.survfit Add Lines to a Survival Plot (survival5)
lines.ts Time-Series Objects (base)
list Lists -- Generic and Dotted Pairs (base)
list.files List the Files in a Directory/Folder (base)
lle Calculates local Lyapunov exponents for plotting. (funfits)
llik.comp.stable Stable Generalized Linear Regression Model (stable)
llik.stable Stable Generalized Linear Regression Model (stable)
lm Fitting Linear Models (base)
lm.fit Fitting Linear Models (base)
lm.fit.null Fitting Linear Models (base)
lm.gls Fit Linear Models by Generalized Least Squares (MASS)
lm.influence Regression Diagnostics (base)
lm.ridge Ridge Regression (MASS)
lm.summaries Accessing Linear Model Fits (base)
lm.wfit Fitting Linear Models (base)
lm.wfit.null Fitting Linear Models (base)
lme Linear Mixed-Effects Models (nlme)
lme.formula Linear Mixed-Effects Models (nlme)
lme.groupedData LME fit from groupedData Object (nlme)
lme.lmList LME fit from lmList Object (nlme)
lmeControl Control Values for lme Fit (nlme)
lmeObject Fitted lme Object (nlme)
lmeScale Scale for lme Optimization (nlme)
lmeStruct Linear Mixed-Effects Structure (nlme)
lmList List of lm Objects with a Common Model (nlme)
lmList.formula List of lm Objects with a Common Model (nlme)
lmList.groupedData lmList Fit from a groupedData Object (nlme)
lmsreg Resistant Regression (lqs)
load Reload Saved Datasets (base)
loadings Principal Components Analysis (mva)
local Evaluate an (Unevaluated) Expression (base)
locator Graphical Input (base)
locfit Local Regression, Likelihood and Density Estimation. (locfit)
locfit.raw Local Regression, Likelihood and Density Estimation. (locfit)
locpoly Estimate Functions Using Local Polynomials (KernSmooth)
loess Local Polynomial Regression Fitting (modreg)
loess.control Set Parameters for Loess (modreg)
loess.smooth Scatter Plot with Smooth Curve Fitted by Loess (modreg)
Log Logarithms and Exponentials (base)
log Logarithms and Exponentials (base)
log10 Logarithms and Exponentials (base)
log2 Logarithms and Exponentials (base)
logDet Extract the Logarithm of the Determinant (nlme)
logDet.corStruct Extract corStruct Log-Determinant (nlme)
logDet.pdBlocked Extract Log-Determinant from a pdMat Object (nlme)
logDet.pdCompSymm Extract Log-Determinant from a pdMat Object (nlme)
logDet.pdDiag Extract Log-Determinant from a pdMat Object (nlme)
logDet.pdIdent Extract Log-Determinant from a pdMat Object (nlme)
logDet.pdMat Extract Log-Determinant from a pdMat Object (nlme)
logDet.pdSymm Extract Log-Determinant from a pdMat Object (nlme)
logDet.reStruct Extract reStruct Log-Determinants (nlme)
Logic Logical Operators (base)
logical Logical Vectors (base)
logique Logical Coding (multiv)
Logistic The Logistic Distribution (base)
logit Logit of Proportions (boot)
logitord Ordinal Random Effects Models with Dropouts (repeated)
logLik Extract Log-Likelihood (nls)
loglik Loglikelihood for model-based hierarchical clustering. (mclust)
logLik.corStruct Extract corStruct Log-Likelihood (nlme)
logLik.gls Log-Likelihood of a gls Object (nlme)
logLik.glsStruct Log-Likelihood of a glsStruct Object (nlme)
logLik.gnls Log-Likelihood of a gnls Object (nlme)
logLik.gnlsStruct Log-Likelihood of a gnlsStruct Object (nlme)
logLik.lm Extract Log-Likelihood from an lm Object (nlme)
logLik.lme Log-Likelihood of an lme Object (nlme)
logLik.lmeStruct Log-Likelihood of an lmeStruct Object (nlme)
logLik.lmeStructInt Log-Likelihood of an lmeStruct Object (nlme)
logLik.lmList Log-Likelihood of an lmList Object (nlme)
logLik.nls Nonlinear Least Squares (nls)
loglik.norm Observed-data loglikelihood for normal data (norm)
logLik.reStruct Calculate reStruct Log-Likelihood (nlme)
logLik.varComb Extract varFunc logLik (nlme)
logLik.varFunc Extract varFunc logLik (nlme)
loglin Fitting Log-Linear Models (base)
loglm Fit Log-Linear Models by Iterative Proportional Scaling (MASS)
Lognormal The Log Normal Distribution (base)
logpost.norm Observed-data log-posterior for normal data (norm)
logspline.fit Logspline Density Estimation (logspline)
logspline.plot Plots a Logspline Density, Distribution Function, Hazard Function or Survival Function. (logspline)
logspline.summary Summarizes Various Logspline Density Estimates (logspline)
logtrans Estimate log Transformation Parameter (MASS)
longley Longley's Regression Data (base)
lower.tri Lower and Upper Triangular Part of a Matrix (base)
lowess Scatter Plot Smoothing (base)
lplot Labeled plot (funfits)
lqs Resistant Regression (lqs)
lqs.default Resistant Regression (lqs)
lqs.formula Resistant Regression (lqs)
ls List Objects (base)
ls.diag Compute Diagnostics for `lsfit' Regression Results (base)
ls.print Print `lsfit' Regression Results (base)
ls.str Compactly Display the Structure of an Arbitrary R Object (base)
lsf.str Compactly Display the Structure of an Arbitrary R Object (base)
lsfit Find the Least Squares Fit (base)
lt.to.name Convert notations (wavelet) (wavethresh)
ltsreg Resistant Regression (lqs)
lung Mayo Clinic Lung Cancer Data (survival5)
lvq1 Learning Vector Quantization 1 (class)
lvq2 Learning Vector Quantization 2.1 (class)
lvq3 Learning Vector Quantization 3 (class)
lvqinit Initialize a LVQ Codebook (class)
lvqtest Classify Test Set from LVQ Codebook (class)
lynx Canadian Lynx Trappings (boot)

-- M --

maas maas- zinc measurements (sgeostat)
maas.bank maas.bank - coordinates (sgeostat)
Machine Machine Characteristics (base)
machine Determine the Machine R is Running On (base)
macorr Calculate MA Autocorrelation Function (timeslab)
mad Median Absolute Deviation (base)
madt Simulate Data from an MA Process (timeslab)
mahalanobis Mahalanobis Distance (base)
make.Amatrix Matrix relating predicted values to the dependent (Y) values (funfits)
make.Amatrix.krig Computes matrix that relates predicted values to the vector of dependent variables (Y) (funfits)
make.Amatrix.tps Computes matrix that relates predicted values to the vector of dependent variables (Y) (funfits)
make.drb Evaluates the Demmler-Reinsch basis fucntions (funfits)
make.lags Lags vectors and covariates correctly so that an autoregressive model can be estimated by regression. (funfits)
make.link Create a Link for GLM families (base)
make.lle Calculates global and local Lyapunov exponents (funfits)
make.names Make Legal R Names Out of Strings (base)
make.socket Create a Socket Connection (base)
make.surface.grid Makes a grid surface that can be plotted. (funfits)
make.tables Create model.tables (base)
make.tables.aovproj Create model.tables (base)
make.tables.aovprojlist Create model.tables (base)
makeparam.norm Convert normal parameters to packed storage (norm)
mammals Brain and Body Weights in Mammals (boot)
manaus Average Heights of the Rio Negro river at Manaus (boot)
mantelhaen.test Mantel-Haenszel Chi-Square Test for Count Data (ctest)
marg.hom Marginal Homogeneity Model (repeated)
mars Multivariate Additive Regression Splines (mda)
masmooth Apply Moving Average Smoother to a Vector (S Version) (timeslab)
masp Calculate MA Spectral Density Function (timeslab)
mat.or.vec Create a Matrix or a Vector (base)
match Value Matching (base)
match.arg Argument Verification Using Partial Matching (base)
match.call Argument Matching (base)
match.fun Function Verification for ``Function Variables'' (base)
Math Miscellaneous Mathematical Functions (base)
Math.data.frame Internal and Group Methods and Generic Functions (base)
Math.factor Internal and Group Methods and Generic Functions (base)
Math.polynomial Math Group Methods for Polynomials (polynom)
matlines Plot Columns of Matrices (base)
matmult Matrix Multiplication (base)
matplot Plot Columns of Matrices (base)
matpoints Plot Columns of Matrices (base)
matrix Matrices (base)
matrix<- Assign Matrix Values (nlme)
matrix<-.pdBlocked Assign Matrix to a pdMat Object (nlme)
matrix<-.pdMat Assign Matrix to a pdMat Object (nlme)
matrix<-.reStruct Assign reStruct Matrices (nlme)
max Maxima and Minima (base)
max.col Find Maximum Position in Matrix (MASS)
mca Multiple Correspondence Analysis (MASS)
mcmc Markov Chain Monte Carlo Objects (coda)
mcmc.list Replicated Markov Chain Monte Carlo Objects (coda)
mcnemar.test McNemar's Chi-square Test for Count Data (ctest)
mcyc Acc(De?)celeration of a Motorcycle Hitting a Wall (locfit)
mcycle Data from a Simulated Motorcycle Accident (boot)
mda Mixture Discriminant Analysis (mda)
mda.norm Monotone data augmentation for incomplete multivariate normal data (norm)
mda.start Provide starting weights for the mda function (mda)
mdeaths Monthly Deaths from Lung Diseases in the UK (MASS)
mdy.date Convert to Julian dates. (date)
me EM for parameterized MVN mixture models (mclust)
me.EEE EM for constant-variance MVN mixture models (mclust)
me.EEV EM for constant shape, constant volume MVN mixture models (mclust)
me.EI EM for spherical, constant-volume MVN mixture models (mclust)
me.VEV EM for constant shape, varying volume MVN mixture models (mclust)
me.VI EM for spherical, varying volume MVN mixture models (mclust)
me.VVV EM for unconstrained MVN mixture models (mclust)
mean Arithmetic Mean (base)
mean.default Arithmetic Mean (base)
meanvar.rpart Mean-Variance Plot for an Rpart Object (rpart)
median Median Value (base)
medpolish Median Polish of a Matrix (eda)
Melanoma Survival from Malignant Melanoma (MASS)
melanoma Survival from Malignant Melanoma (boot)
members Cluster Memberships (multiv)
Memory Memory Available for Data Storage (base)
memory.profile Profile the Usage of Cons Cells (base)
menarche Age of Menarche data (MASS)
menu Menu Interaction Function (base)
meta.DSL Random effects (DerSimonian-Laird) meta-analysis (rmeta)
meta.MH Fixed effects (Mantel-Haenszel) meta-analysis (rmeta)
Methods Internal and Group Methods and Generic Functions (base)
methods Class Methods (base)
mexp Matrix Exponentiation (rmutil)
MGH09 More, Gabrow and Hillstrom example 9 (NISTnls)
MGH10 More, Gabrow and Hillstrom example 10 (NISTnls)
MGH17 More, Gabrow and Hillstrom example 17 (NISTnls)
mhclass Classifications for hierarchical clustering. (mclust)
mhtree Classification Tree for Model-based Gaussian hierarchical clustering. (mclust)
mhtree.EEE Classification tree for hierarchical clustering for Gaussian models with constant variance. (mclust)
mhtree.EFV Classification tree for hierarchical clustering for Gaussian models with equal volume and fixed shape. (mclust)
mhtree.EI Classification tree for hierarchical clustering for Gaussian models with uniform diagonal variance. (mclust)
mhtree.VFV Classification tree for hierarchical clustering for Gaussian models with equal volume and constant shape. (mclust)
mhtree.VI Classification tree for hierarchical clustering for Gaussian models with diagonal variance. (mclust)
mhtree.VVV Classification tree for hierarchical clustering for Gaussian models with unconstrained variance. (mclust)
mi.inference Multiple imputation inference (norm)
michelson Michelson's Speed of Light Data (MASS)
min Maxima and Minima (base)
mine Fracture Counts in Coal Mines (locfit)
minitri Mini triathlon results Results from a mini triathlon sponsored by Bud Lite, held in Cary, NC, June 1990. Times are in minutes for the male 30-34 group. Components are: swim: (1/2 mile) bike: (15 miles) run: (4 miles) (funfits)
minn38 Minnesota High School Graduates of 1938 (MASS)
minutes Return Hours, Minutes, or Seconds from a Times Object (chron)
misclass.tree Report Numbers of Misclassifications by a Classification Tree (tree)
Misra1a Monomolecular Absorption Data (NISTnls)
Misra1b Monomolecular Absorption Data (NISTnls)
Misra1c Monomolecular Absorption data (NISTnls)
Misra1d Monomolecular Absorption data (NISTnls)
missing Does a Formal Argument have a Value? (base)
mixproj Displays one standard deviation of an MVN mixture classification. (mclust)
mlbench.2dnormals 2-dimensional Gaussian Problem (mlbench)
mlbench.cassini Cassini: A 2 Dimensional Problem (mlbench)
mlbench.circle Circle in a Square Problem (mlbench)
mlbench.cuboids Cuboids: A 3 Dimensional Problem (mlbench)
mlbench.friedman1 Benchmark Problem Friedman 1 (mlbench)
mlbench.friedman2 Benchmark Problem Friedman 2 (mlbench)
mlbench.friedman3 Benchmark Problem Friedman 3 (mlbench)
mlbench.peak Peak Benchmark Problem (mlbench)
mlbench.ringnorm Ringnorm Benchmark Problem (mlbench)
mlbench.spirals Two Spirals Benchmark Problem (mlbench)
mlbench.threenorm Threenorm Benchmark Problem (mlbench)
mlbench.twonorm Twonorm Benchmark Problem (mlbench)
mlbench.waveform Waveform Database Generator (written in C) (mlbench)
mlbench.xor Continuous XOR Benchmark Problem (mlbench)
Mod Complex Vectors (base)
mode The (Storage) Mode of an Object (base)
mode.stable Stable Generalized Linear Regression Model (stable)
mode<- The (Storage) Mode of an Object (base)
model.extract Extract Components from a Model Frame (base)
model.frame Extracting the ``Environment'' of a Model Formula (base)
model.frame.aovlist Extracting the ``Environment'' of a Model Formula (base)
model.frame.default Extracting the ``Environment'' of a Model Formula (base)
model.frame.glm Extracting the ``Environment'' of a Model Formula (base)
model.frame.lm Extracting the ``Environment'' of a Model Formula (base)
model.frame.rpart Create a Model Frame for fitting an Rpart Object (rpart)
model.matrix Construct Design Matrices (base)
model.matrix.default Construct Design Matrices (base)
model.matrix.glm.null Construct Design Matrices (base)
model.matrix.lm Construct Design Matrices (base)
model.matrix.lm.null Construct Design Matrices (base)
model.matrix.mars produce a model matrix from a `mars' object (mda)
model.matrix.reStruct reStruct Model Matrix (nlme)
model.offset Extract Components from a Model Frame (base)
model.response Extract Components from a Model Frame (base)
model.tables Compute Tables of Results from an Aov Model Fit. (base)
model.tables.aov Compute Tables of Results from an Aov Model Fit. (base)
model.tables.aovlist Compute Tables of Results from an Aov Model Fit. (base)
model.weights Construct Design Matrices (base)
modreg-internal Internal modreg functions (modreg)
moment Statistical Moment (e1071)
mona Monothetic Analysis (cluster)
mona.object Monothetic Analysis Object (cluster)
monic Monic Polynomials (polynom)
month.abb Built-in Constants (base)
month.day.year Convert between Julian and Calendar Dates (chron)
month.name Built-in Constants (base)
months Return Various Periods from a Chron or Dates Object (chron)
mood.test Mood Two-Sample Test of Scale (ctest)
morley The Michaelson-Morley Speed of Light Data (Rnotes)
morths Henderson and Sheppard Mortality Dataset (locfit)
mosaicplot Mosaic Plots (base)
mosaicplot.default Mosaic Plots (base)
mosaicplot.formula Mosaic Plots (base)
motor Data from a Simulated Motorcycle Accident (boot)
motors Accelerated Life Testing of Motorettes (MASS)
movave Apply Moving Average Smoother to a Vector (Fortran Version) (timeslab)
movbox Form Quantities Needed for Moving Box Plot (timeslab)
movord Apply Moving Order Statistic Operator to a Vector (timeslab)
mpinv Moore-Penrose-Inverse (multilm)
mstep M-step for parameterized MVN mixture models (mclust)
mstep.EEE M-step for constant-variance MVN mixture models (mclust)
mstep.EEV M-step for constant shape, constant volume MVN mixture models (mclust)
mstep.EI M-step for spherical, constant-volume MVN mixture models (mclust)
mstep.VEV M-step for constant shape, constant volume MVN mixture models (mclust)
mstep.VI M-step for spherical, varying volume MVN mixture models (mclust)
mstep.VVV M-step for unconstrained MVN mixture models (mclust)
mtcars Motor Trend Road Tests (base)
mtext Write Text into the Margins of a Plot (base)
multi.menu Choose multiple options from a menu (coda)
multiedit Multiedit for k-NN Classifier (class)
multilm Mulivariate Linear Models (multilm)
multilm.summaries Stabilized Multivariate Tests (multilm)
multinom Fit Multinomial Log-linear Models (nnet)
Multiplicative Binomial The Multiplicative Binomial Distribution (rmutil)
Multiplicative Poisson The Multiplicative Poisson Distribution (rmutil)
multpoly Multiply Two Polynomials (timeslab)
muscle Effect of Calcium Chloride on Muscle Contraction in Rat Hearts (MASS)
mvfft Fast Discrete Fourier Transform (base)
Mvnorm The Multivariate Normal Distribution (e1071)
mvrnorm Simulate from a Multivariate Normal Distribution (MASS)

-- N --

NA Not Available / ``Missing'' Values (base)
na.action NA Action (base)
na.action.default NA Action (base)
na.contiguous NA Handling Routines for Time Series (ts)
na.fail Handle Missing Values in Objects (base)
na.fail.default Handle Missing Values in Objects (base)
na.omit Handle Missing Values in Objects (base)
na.omit.default Handle Missing Values in Objects (base)
na.omit.ts NA Handling Routines for Time Series (ts)
na.remove NA Handling Routines for Time Series (tseries)
na.remove.default NA Handling Routines for Time Series (tseries)
na.remove.ts NA Handling Routines for Time Series (tseries)
na.rpart Handles Missing Values in an Rpart Object (rpart)
na.tree.replace Replace `NA's in Predictor Variables (tree)
name Variable Names (base)
Names Names Associated with an Object (nlme)
names The Names Attribute of an Object (base)
names.default The Names Attribute of an Object (base)
names.dist Distance Matrix Computation (mva)
Names.formula Extract Names from a formula (nlme)
Names.pdBlocked Names of a pdBlocked Object (nlme)
Names.pdMat Names of a pdMat Object (nlme)
Names.reStruct Names of an reStruct Object (nlme)
Names<- Names Associated with an Object (nlme)
names<- The Names Attribute of an Object (base)
names<-.default The Names Attribute of an Object (base)
names<-.dist Distance Matrix Computation (mva)
Names<-.pdMat Names of a pdMat Object (nlme)
Names<-.reStruct Names of an reStruct Object (nlme)
NaN Finite, Infinite and NaN Numbers (base)
nargs The Number of Arguments to a Function (base)
nbkal Negative Binomial Model with Kalman Update (repeated)
nchar Count the Number of Characters (base)
NCOL The Number of Rows/Columns of an Array (base)
ncol The Number of Rows/Columns of an Array (base)
needUpdate Check if Update is Needed (nlme)
needUpdate.default Check if Update is Needed (nlme)
needUpdate.modelStruct Check if a modelStruct Object Needs Updating (nlme)
needUpdate.varComb Check if Update is Needed (nlme)
needUpdate.varIdent Check if Update is Needed (nlme)
negative.binomial Family function for Negative Binomial GLMs (MASS)
NegBinomial The Negative Binomial Distribution (base)
neighbours List of neighbours from a triangulation object (tripack)
NelPlo Nelson-Plosser Macroeconomic Time Series (tseries)
Nelson Dialectric breakdown data (NISTnls)
neuralgas Convex Clustering (cclust)
neuro Neurophysiological Point Process Data (boot)
new.env Environment Access (base)
newcomb Newcomb's Measurements of the Passage Time of Light (MASS)
next Control Flow (base)
NextMethod Class Methods (base)
nextn Highly Composite Numbers (base)
nhtemp Average Yearly Temperatures in New Haven (base)
ninvwish Random normal-inverted Wishart variate (norm)
nise integrated squared error between a density estimate and a Normal density (sm)
nitrofen Toxicity of Nitrofen in Aquatic Systems (boot)
nkden Normal kernel density estimate (funfits)
nkden.cv Cross- validation function for a normal kernel density estimate (funfits)
nkreg Normal kernel regression estimate (funfits)
nlar Nonlinear autoregressive model (funfits)
nlevels The Number of Levels of a Factor (base)
nlm Non-Linear Minimization (base)
nlme Nonlinear Mixed-Effects Models (nlme)
nlme.formula Nonlinear Mixed-Effects Models (nlme)
nlme.nlsList NLME fit from nlsList Object (nlme)
nlmeControl Control Values for nlme Fit (nlme)
nlmeObject Fitted nlme Object (nlme)
nlmeStruct Nonlinear Mixed-Effects Structure (nlme)
nlr Nonlinear Regression (gnlm)
nls Nonlinear Least Squares (nls)
nls.control Control the Iterations in nls (nls)
nlsList List of nls Objects with a Common Model (nlme)
nlsList.formula List of nls Objects with a Common Model (nlme)
nlsList.selfStart nlsList Fit from a selfStart Function (nlme)
nlsModel Create an nlsModel Object (nls)
nlsModel.plinear Create an nlsModel Object (nls)
NLSstAsymptotic Fit the Asymptotic Regression Model (nls)
NLSstAsymptotic.sortedXyData Fit the Asymptotic Regression Model (nls)
NLSstClosestX Inverse Interpolation (nls)
NLSstClosestX.sortedXyData Inverse Interpolation (nls)
NLSstLfAsymptote Horizontal Asymptote on the Left Side (nls)
NLSstLfAsymptote.sortedXyData Horizontal Asymptote on the Left Side (nls)
NLSstRtAsymptote Horizontal Asymptote on the Right Side (nls)
NLSstRtAsymptote.sortedXyData Horizontal Asymptote on the Right Side (nls)
nmise mean integrated squared error for density estimation with normal data (sm)
nn.pattern Create an NN Pattern (snns)
nnbr nearest neighbour distances from data in one or two dimensions (sm)
nnet Fit Neural Networks (nnet)
nnet.default Fit Neural Networks (nnet)
nnet.formula Fit Neural Networks (nnet)
nnet.Hess Evaluates Hessian for a Neural Network (nnet)
nnreg Fits a surface based on a neural network (funfits)
nnregCI Finds a confidence set of parameters for a neural net fit. (funfits)
nodal Nodal Involvement in Prostate Cancer (boot)
noquote Class for ``no quote'' Printing of Strings (base)
nordr Nonlinear Ordinal Regression (gnlm)
norm.ci Normal Approximation Confidence Intervals (boot)
Normal The Normal Distribution (base)
normalize Normalize a vector (snns)
nottem Average Monthly Temperatures at Nottingham, 1920-1939 (MASS)
NotYet Not Yet Implemented Functions and Unused Arguments (base)
NotYetImplemented Not Yet Implemented Functions and Unused Arguments (base)
NotYetUsed Not Yet Implemented Functions and Unused Arguments (base)
npk Classical N, P, K Factorial Experiment (MASS)
npr1 US Naval Petroleum Reserve No. 1 data (MASS)
NROW The Number of Rows/Columns of an Array (base)
nrow The Number of Rows/Columns of an Array (base)
ns Generate a Basis Matrix for Natural Cubic Splines (splines)
nuclear Nuclear Power Station Construction Data (boot)
NULL The Null Object (base)
Null Null Spaces of Matrices (MASS)
numeric Numeric Vectors (base)
NW.kernel Nadaraya-Watson non-parametric regression (haerdle)
NW.Warping Nadaraya-Watson non-parametric regression via WARPing (haerdle)

-- O --

oats Data from an Oats Field Trial (MASS)
objects List Objects (base)
odot Form Outer Product of Two Vectors (timeslab)
offset Include an Offset in a Model Formula (base)
oil The Gasoline Yield Data (Rnotes)
olvq1 Optimized Learning Vector Quantization 1 (class)
OME Tests of Auditory Perception in Children with OME (MASS)
on.convex.hull Determines if points are on the convex hull of a triangulation object (tripack)
on.exit Function Exit Code (base)
one.in.n one-in-n classification encoding (snns)
Ops.data.frame Internal and Group Methods and Generic Functions (base)
Ops.factor Internal and Group Methods and Generic Functions (base)
Ops.ordered Internal and Group Methods and Generic Functions (base)
Ops.polynomial Arithmetic Ops Group Methods for Polynomials (polynom)
Ops.ts Internal ts functions (ts)
optim.funfits Finds optimum within a region (funfits)
optimise One Dimensional Optimization (base)
optimize One Dimensional Optimization (base)
options Options Settings (base)
OrchardSprays Potency of Orchard Sprays (base)
order Ordering Permutation (base)
ordered Factors (base)
orlm Fit Robust Linear Regression Model (MASS)
ortho.series0.1 Orthogonal series estimator on [0,1] (haerdle)
outer Outer Product of Arrays (base)
outer.convhull Version of outer which operates only in a convex hull (tripack)
ovarian Ovarian cancer survival data (survival5)
oz Plot the Australian coastline and states (oz)
Ozone Los Angeles ozone pollution data, 1976 (mlbench)
ozone Data set of ozone measurements at 20 Chicago monitoring stations. (funfits)

-- P --

pacf Calculate Sample Partial Autocorrelation Function (timeslab)
pacf.default Autocovariance and Autocorrelation Function Estimation (ts)
pacf.mts Autocovariance and Autocorrelation Function Estimation (ts)
pacf.ts Autocovariance and Autocorrelation Function Estimation (ts)
pack8bit Packing of 8-bit Integers (wavethresh)
package.contents Package Contents and Description (base)
package.description Package Contents and Description (base)
page Invoke a Pager on an R Object (base)
painters The Painter's Data of de Piles (Rnotes)
pair Pair Object (sgeostat)
pairlist Lists -- Generic and Dotted Pairs (base)
pairs Scatterplot Matrices (base)
pairs.compareFits Pairs Plot of compareFits Object (nlme)
pairs.default Scatterplot Matrices (base)
pairs.formula Formula Notation for Scatterplot Matrices (base)
pairs.lda Produce Pairwise Scatterplots from an `lda' Fit (MASS)
pairs.lme Pairs Plot of an lme Object (nlme)
pairs.lmList Pairs Plot of an lmList Object (nlme)
palette Set or View the Graphics Palette (base)
Palettes Color Palettes (base)
pam Partitioning Around Medoids (cluster)
pam.object Partitioning Around Medoids Object (cluster)
panel.smooth Simple Panel Plot (base)
par Set or Query Graphical Parameters (base)
Paren Parentheses and Braces (base)
parent.frame Functions to Access the Function Call Stack (base)
Pareto The Pareto Distribution (rmutil)
parse Parse Expressions (base)
parse.dcf Parse Debian Control File Format (base)
partar Calculate AR Coefficients from Autocorrelations (timeslab)
partition Partitioning by Iterative Optimization (multiv)
partition.object Partitioning Object (cluster)
partition.tree Plot the Partitions of a simple Tree Model (tree)
partuniq Classifies Data According to Unique Observations (mclust)
paste Concatenate Strings (base)
Patacamaya Patacamaya: Greenhouse experiment at Patacamaya (quantreg)
path Finds path of steepest ascent (funfits)
path.rpart Follow Paths to Selected Nodes of an Rpart Object (rpart)
paulsen Neurotransmission in Guinea Pig Brains. (boot)
pause Pause before continuing execution (sm)
pbc Mayo Clinic Primary Biliary Cirrhosis Data (survival5)
pbeta The Beta Distribution (base)
pbetabinom The Beta Binomial Distribution (rmutil)
pbinom The Binomial Distribution (base)
pbirth Fit Overdispersed Count Data as a Birth Process (event)
pboxcox The Box-Cox Distribution (rmutil)
pburr The Burr Distribution (rmutil)
pca Principal Components Analysis (multiv)
pcauchy The Cauchy Distribution (base)
pchisq The (non-central) Chi-Square Distribution (base)
pdBlocked Positive-Definite Block Diagonal Matrix (nlme)
pdClasses Positive-Definite Matrix Classes (nlme)
pdCompSymm Positive-Definite Matrix with Compound Symmetry Structure (nlme)
pdConstruct Construct pdMat Objects (nlme)
pdConstruct.pdBlocked Construct pdBlocked Objects (nlme)
pdConstruct.pdCompSymm Construct pdMat Objects (nlme)
pdConstruct.pdDiag Construct pdMat Objects (nlme)
pdConstruct.pdIdent Construct pdMat Objects (nlme)
pdConstruct.pdMat Construct pdMat Objects (nlme)
pdConstruct.pdNatural Construct pdMat Objects (nlme)
pdConstruct.pdSymm Construct pdMat Objects (nlme)
pdDiag Diagonal Positive-Definite Matrix (nlme)
pdFactor Square-Root Factor of a Positive-Definite Matrix (nlme)
pdFactor.pdBlocked Square-Root Factor of a Positive-Definite Matrix (nlme)
pdFactor.pdCompSymm Square-Root Factor of a Positive-Definite Matrix (nlme)
pdFactor.pdDiag Square-Root Factor of a Positive-Definite Matrix (nlme)
pdFactor.pdIdent Square-Root Factor of a Positive-Definite Matrix (nlme)
pdFactor.pdMat Square-Root Factor of a Positive-Definite Matrix (nlme)
pdFactor.pdNatural Square-Root Factor of a Positive-Definite Matrix (nlme)
pdFactor.reStruct Extract Square-Root Factor from Components of an reStruct Object (nlme)
pdIdent Multiple of the Identity Positive-Definite Matrix (nlme)
pdiscrete Discrete Distribution (e1071)
pdMat Positive-Definite Matrix (nlme)
pdMatrix Extract Matrix or Square-Root Factor from a pdMat Object (nlme)
pdMatrix.pdBlocked Extract Matrix or Square-Root Factor from a pdMat Object (nlme)
pdMatrix.pdCompSymm Extract Matrix or Square-Root Factor from a pdMat Object (nlme)
pdMatrix.pdDiag Extract Matrix or Square-Root Factor from a pdMat Object (nlme)
pdMatrix.pdIdent Extract Matrix or Square-Root Factor from a pdMat Object (nlme)
pdMatrix.pdMat Extract Matrix or Square-Root Factor from a pdMat Object (nlme)
pdMatrix.pdSymm Extract Matrix or Square-Root Factor from a pdMat Object (nlme)
pdMatrix.reStruct Extract Matrix or Square-Root Factor from Components of an reStruct Object (nlme)
pdNatural General Positive-Definite Matrix in Natural Parametrization (nlme)
pdoublebinom The Double Binomial Distribution (rmutil)
pdoublepois The Double Poisson Distribution (rmutil)
pdSymm General Positive-Definite Matrix (nlme)
pentagamma Special Functions of Mathematics (base)
perdgm Calculate Periodogram of a Time Series (timeslab)
pergram Calculate and plot a periodogram (growth)
periodicSpline Create a Periodic Interpolation Spline (splines)
periodicSpline.default Create a Periodic Interpolation Spline (splines)
periodicSpline.formula Create a Periodic Interpolation Spline (splines)
persp Perspective Plots (base)
persp.init, Sets up axes for perspective plotting using other functions from persp family. (funfits)
petrol N. L. Prater's Petrol Refinery Data (MASS)
pexp The Exponential Distribution (base)
pf The F Distribution (base)
pgamma The Gamma Distribution (base)
pgammacount The Gamma Count Distribution (rmutil)
pgeom The Geometric Distribution (base)
pgextval The Generalized Extreme Value Distribution (rmutil)
pggamma The Generalized Gamma Distribution (rmutil)
pginvgauss The Generalized Inverse Gaussian Distribution (rmutil)
pglogis The Generalized Logistic Distribution (rmutil)
pgweibull The Generalized Weibull Distribution (rmutil)
phjorth The Hjorth Distribution (rmutil)
phones Belgium Phone Calls 1950-1973 (boot)
phyper The Hypergeometric Distribution (base)
pi Built-in Constants (base)
pico Invoke a Text Editor (base)
pictex A PicTeX Graphics Driver (base)
piechart Pie Charts (base)
Pima.te Diabetes in Pima Indian Women (MASS)
Pima.tr Diabetes in Pima Indian Women (MASS)
Pima.tr2 Diabetes in Pima Indian Women (MASS)
PimaIndiansDiabetes Pima Indians Diabetes Database (mlbench)
pinvgauss The Inverse Gaussian Distribution (rmutil)
pkpd Pharmacokinetic models (rmutil)
PlantGrowth Results from an Experiment on Plant Growth (base)
plaplace The Laplace Distribution (rmutil)
Platform Platform Specific Variables (base)
plevy The Levy Distribution (rmutil)
plnorm The Log Normal Distribution (base)
plogis The Logistic Distribution (base)
plogspiine Logspline Density Estimation (logspline)
plot Generic X-Y Plotting (base)
plot.ACF Plot an ACF Object (nlme)
plot.acf Autocovariance function Estimation (bats)
plot.agnes Plots of an Agglomerative Hierarchical Clustering (cluster)
plot.amif Auto Mutual Information Function (tseries)
plot.augPred Plot an augPred Object (nlme)
plot.boot Plots of the Output of a Bootstrap Simulation (boot)
plot.cclust Plot Clustered Data (cclust)
plot.compareFits Plot a compareFits Object (nlme)
plot.cox.zph Graphical Test of Proportional Hazards (survival5)
plot.cum.pergram Calculate and plot a periodogram (growth)
plot.data.frame Data Frames (base)
plot.default The Default Scatterplot Function (base)
plot.density Kernel Density Estimation (base)
plot.diana Plots of a Divisive Hierarchical Clustering (cluster)
plot.dist Kaplan-Meier Survival Curves (event)
plot.ecdf Empirical Cumulative Distribution Function (stepfun)
plot.factor Plotting Factor Variables (base)
plot.formula Formula Notation for Scatterplots (base)
plot.function Draw Function Plots (base)
plot.garch Fit GARCH Models to Time Series (tseries)
plot.gls Plot a gls Object (nlme)
plot.hazard Kaplan-Meier Survival Curves (event)
plot.hclust Hierarchical Clustering (mva)
plot.imwd Plot Method for an `imwd' object (wavethresh)
plot.imwdc Plot Method for an `imwdc' object (wavethresh)
plot.intervals.lmList Plot lmList Confidence Intervals (nlme)
plot.krig Diagnoistic and summary plots of the kriging object (funfits)
plot.lda Plot Method for Class `lda' (MASS)
plot.lle Plots local Lyapunov exponents (funfits)
plot.lm Plot Diagnostics for an "lm" Object (base)
plot.lme Plot an lme Object (nlme)
plot.lmList Plot an lmList Object (nlme)
plot.locfit Plot an object of class locfit. (locfit)
plot.locfitpred Plot a "locfitpred" object. (locfit)
plot.mca Plot Method for Objects of Class `mca' (MASS)
plot.mcmc Summary plots of mcmc objects (coda)
plot.medpolish Median Polish of a Matrix (eda)
plot.meta.DSL Random effects (DerSimonian-Laird) meta-analysis (rmeta)
plot.meta.MH Fixed effects (Mantel-Haenszel) meta-analysis (rmeta)
plot.mlbench Plot mlbench objects (mlbench)
plot.mlm Accessing Linear Model Fits (base)
plot.mona Banner of Monothetic Divisive Hierarchical Clusterings (cluster)
plot.mts Time-Series Objects (base)
plot.new Create / Start a New Plot Frame (base)
plot.nffGroupedData Plot an nffGroupedData Object (nlme)
plot.nfnGroupedData Plot an nfnGroupedData Object (nlme)
plot.nmGroupedData Plot an nmGroupedData Object (nlme)
plot.nnreg Diagnoistic and summary plots of a neural net regression object (funfits)
plot.partition Plot of a Partition of the Data Set (cluster)
plot.pergram Calculate and plot a periodogram (growth)
plot.pnm Portable Anymap Images (e1071)
plot.point Plot Point Objects (sgeostat)
plot.polymars plot.polymars - plots for polymars models (polymars)
plot.polynomial Plot Method for Polynomials (polynom)
plot.polySpline Piecewise Polynomial Spline Representation (splines)
plot.ppr Plot Ridge Functions for Projection Pursuit Regression Fit (modreg)
plot.prcomp Principal Components Analysis (mva)
plot.princomp Principal Components Analysis (mva)
plot.profile.nls Plot a profile.nls Object (nls)
plot.ranef.lme Plot a ranef.lme Object (nlme)
plot.ranef.lmList Plot a ranef.lmList Object (nlme)
plot.repeated Create a repeated object, removing NAs (rmutil)
plot.residuals Plot Residuals (rmutil)
plot.rpart Plot an Rpart Object (rpart)
plot.simulate.lme simulate lme models (nlme)
plot.spec Spectral Density Estimation (bats)
plot.spec.coherency Spectral Density Estimation (ts)
plot.spec.phase Spectral Density Estimation (ts)
plot.spline Evaluate a spline at new values of x (splines)
plot.sreg Plots smoothing spline regression object (funfits)
plot.stepfun Plot Step Functions (stepfun)
plot.stft Plots an Object of Type stft. (e1071)
plot.stl Seasonal Decomposition of Time Series by Loess (ts)
plot.subsets Graphical table of best subsets (leaps)
plot.surface Plots a surface (funfits)
plot.survfit Plot Method for `survfit' (survival5)
plot.tps Diagnoistic and summary plots for a thin plate spline regression object (funfits)
plot.tree.sequence Plot a Tree Sequence (tree)
plot.tri Plot a triangulation object (tripack)
plot.ts Time-Series Objects (base)
plot.tskernel Smoothing Kernel Objects (ts)
plot.Variogram Plot a Variogram Object (nlme)
plot.variogram Plot Variogram (sgeostat)
plot.voronoi Plot a voronoi object (tripack)
plot.wd Plot Method for a `wd' object (wavethresh)
plot.window Creates a motif graphics window. (funfits)
plot.xy Basic Internal Plot Function (base)
plot.xyVector Construct an xyVector Object (splines)
plotbyfactor x-y scatterplot, colored by levels of a factor. (locfit)
plotcp Plot a Complexity Parameter Table for an Rpart Fit (rpart)
plotmath Mathematical Annotation in R (base)
plotsp Form Plot of a (True or Sample) Spectral Density (timeslab)
pls1a Univariate Partial Least Squares Regression (pls)
pls1b Univariate Partial Least Squares Regression (pls)
pls1c Univariate Partial Least Squares Regression (pls)
pltree Clustering Trees - Generic Function (cluster)
pltree.twins Clustering Tree of an Agglomerative or a Divisive Hierarchical Clustering (cluster)
pmatch Partial String Matching (base)
pmax Maxima and Minima (base)
pmin Maxima and Minima (base)
pmultbinom The Multiplicative Binomial Distribution (rmutil)
pmultpois The Multiplicative Poisson Distribution (rmutil)
pnbinom The Negative Binomial Distribution (base)
pnchisq Defunct Functions (base)
pnm Portable Anymap Images (e1071)
pnorm The Normal Distribution (base)
point Point Object (sgeostat)
points Add Points to a Plot (base)
points.default Add Points to a Plot (base)
points.polynomial Points Method for Polynomials (polynom)
pointwise Internal modreg functions (modreg)
poisons Animal Survival Times (boot)
Poisson The Poisson Distribution (base)
poisson Family Objects for Models (base)
polar Pole Positions of New Caledonian Laterites (boot)
poly Compute Orthogonal Polynomials (base)
poly.calc Calculate Polynomials from Zeros or Values (polynom)
poly.from.roots Calculate Polynomials from Zeros or Values (polynom)
poly.from.values Calculate Polynomials from Zeros or Values (polynom)
poly.from.zeros Calculate Polynomials from Zeros or Values (polynom)
poly.orth Construct Orthogonal Polynomials (polynom)
polygon Polygon Drawing (base)
polymars Multi-response Multivariate Adaptive Regression Splines (polymars)
polynomial Polynomials (polynom)
polyreg simple minded polynomial regression (mda)
polyroot Find Zeros of a Real or Complex Polynomial (base)
polyrt Find the Roots of a Polynomial Given its Coefficients (timeslab)
polySpline Piecewise Polynomial Spline Representation (splines)
polySpline.bSpline Piecewise Polynomial Spline Representation (splines)
polySpline.nbSpline Piecewise Polynomial Spline Representation (splines)
polySpline.pbSpline Piecewise Polynomial Spline Representation (splines)
polySpline.polySpline Piecewise Polynomial Spline Representation (splines)
pooledSD Extract Pooled Standard Deviation (nlme)
portfolio.optim Portfolio Optimization (tseries)
portfolio.optim.default Portfolio Optimization (tseries)
portfolio.optim.ts Portfolio Optimization (tseries)
post.rpart PostScript Presentation Plot of an Rpart Object (rpart)
postscript PostScript Graphics (base)
pottery Archaelogical Pottery Data (Rnotes)
potthoff Potthoff and Roy growth curve model (growth)
power Create a Power Link Object (base)
power exponential The power exponential Distribution (rmutil)
pp Create a Point Process Vector from Times between Events (event)
PP.test Phillips--Perron Unit Root Test (ts)
ppareto The Pareto Distribution (rmutil)
ppgetregion Get Domain for Spatial Point Pattern Analyses (spatial)
ppinit Read a Point Process Object from a File (spatial)
pplik Pseudo-likelihood Estimation of a Strauss Spatial Point Process (spatial)
ppoints Ordinates for Probability Plotting (base)
ppois The Poisson Distribution (base)
ppowexp The power exponential Distribution (rmutil)
ppr Projection Pursuit Regression (modreg)
ppr.default Projection Pursuit Regression (modreg)
ppr.formula Projection Pursuit Regression (modreg)
ppregion Set Domain for Spatial Point Pattern Analyses (spatial)
prcomp Principal Components Analysis (mva)
precip Annual Precipitation in US Cities (base)
predict Model Predictions (base)
predict.ar Fit Autoregressive Models to Time Series (ts)
predict.arima0 ARIMA Modelling of Time Series -- Preliminary Version (ts)
predict.bruto a method for making predictions from a `bruto' object. (mda)
predict.bs Evaluate a Predefined Spline Basis at New Values (splines)
predict.bSpline Evaluate a spline at new values of x (splines)
predict.cclust Assign clusters to new data (cclust)
predict.fda make predictions from an fda object (mda)
predict.garch Fit GARCH Models to Time Series (tseries)
predict.glm Predict Method for GLM Fits (base)
predict.gls Predictions from a gls Object (nlme)
predict.gnls Predictions from a gnls Object (nlme)
predict.krig Evaluation of kriging surface (funfits)
predict.lda Classify Multivariate Observations by Linear Discrimination (MASS)
predict.lm Predicting from Linear Model Fits (base)
predict.lme Predictions from an lme Object (nlme)
predict.lmList Predictions from an lmList Object (nlme)
predict.locfit Prediction from a Locfit object. (locfit)
predict.loess Predict Loess Curve or Surface (modreg)
predict.lqs Predict from an lqs Fit (lqs)
predict.mars make predictions from a `mars' object (mda)
predict.mca Predict Method for Class `mca' (MASS)
predict.mda make predictions from an mda object (mda)
predict.mlm Predicting from Linear Model Fits (base)
predict.nbSpline Evaluate a spline at new values of x (splines)
predict.netfit Evaluation of a neural net fit based on a model component (funfits)
predict.nlme Predictions from an nlme Object (nlme)
predict.nls Predicting from Nonlinear Least Squares Fits (nls)
predict.nnet Predict New Examples by a Trained Neural Net (nnet)
predict.nnreg Evaluation of neural net surface. (funfits)
predict.npolySpline Evaluate a spline at new values of x (splines)
predict.ns Evaluate a Predefined Spline Basis at New Values (splines)
predict.pbSpline Evaluate a spline at new values of x (splines)
predict.polymars predict.polymars - fitted values from a `polymars' model (polymars)
predict.polynomial Evaluate a Polynomial (polynom)
predict.polySpline Piecewise Polynomial Spline Representation (splines)
predict.ppolySpline Evaluate a spline at new values of x (splines)
predict.ppr Projection Pursuit Regression (modreg)
predict.princomp Principal Components Analysis (mva)
predict.qda Classify from Quadratic Discriminant Analysis (MASS)
predict.rpart Predictions from a Fitted Rpart Object (rpart)
predict.se Standard errors of predictions (funfits)
predict.se.krig Standard errors of predictions for kriging estimate (funfits)
predict.se.tps Standard errors of predictions for thin plate spline regression (funfits)
predict.smooth.Pspline Smoothing Spline of Arbitrary Order at New Data (pspline)
predict.smooth.spline Predict from Smoothing Spline Fit (modreg)
predict.smooth.spline.fit Fit a Smoothing Spline (modreg)
predict.ssanova Predicting from Smoothing Spline ANOVA Fits (gss)
predict.surface Evaluates a function on a surface (funfits)
predict.surface.se Standard error predictions of surface (funfits)
predict.survreg Predicted Values for a `survreg' Object (survival5)
predict.tps Evaluation of thin plate spline surface. (funfits)
predict.tree Predictions from a Fitted Tree Object (tree)
predLoess Internal modreg functions (modreg)
prelim.norm Preliminary manipulations for a matrix of incomplete continuous data. (norm)
preplot Pre-computations for a Plotting Objeect (base)
preplot.locfit Prediction from a Locfit object. (locfit)
presidents Approval Rating of US Presidents (base)
pressure Vapor Pressure of Mercury as a Function of Temperature (base)
pretty Pretty Breakpoints (base)
Primitive Call a ``Primitive'' Internal Function (base)
principal.curve Fit a Principal Curve (princurve)
princomp Principal Components Analysis (mva)
print Print Values (base)
print.agnes Use `print()' on an `agnes' object (cluster)
print.anova Anova Tables (base)
print.anova.glm Defunct Functions (base)
print.anova.lm Defunct Functions (base)
print.anova.lme Print an anova.lme Object (nlme)
print.aov Fit an Analysis of Variance Model (base)
print.aovlist Fit an Analysis of Variance Model (base)
print.ar Fit Autoregressive Models to Time Series (ts)
print.arima0 ARIMA Modelling of Time Series -- Preliminary Version (ts)
print.atomic Default Printing (base)
print.bdstest BDS Test (tseries)
print.boot Print a Summary of a Bootstrap Object (boot)
print.bootci Print Bootstrap Confidence Intervals (boot)
print.bSpline Create an Interpolation Spline (splines)
print.cclust Convex Clustering (cclust)
print.clara Use `print()' on a `clara' object (cluster)
print.coefmat Print Coefficient Matrices (base)
print.corHF Print a corStruct Object (nlme)
print.corStruct Print a corStruct Object (nlme)
print.corSymm Print a corStruct Object (nlme)
print.data.frame Data Frames (base)
print.default Default Printing (base)
print.density Kernel Density Estimation (base)
print.diana Use `print()' on a `diana' object (cluster)
print.dissimilarity Use `print()' on a `dissimilarity' object (cluster)
print.dist Distance Matrix Computation (mva)
print.dummy.coef Extract Coefficients in Original Coding (base)
print.dummy.coef.list Extract Coefficients in Original Coding (base)
print.ecdf Empirical Cumulative Distribution Function (stepfun)
print.factor Print Values (base)
print.family Family Objects for Models (base)
print.fanny Use `print()' on a `fanny' object (cluster)
print.formula Model Formulae (base)
print.gar Generalized autoregression (repeated)
print.garch Fit GARCH Models to Time Series (tseries)
print.glm Accessing Generalized Linear Model Fits (base)
print.glm.null Accessing Generalized Linear Model Fits (base)
print.gls Print a gls Object (nlme)
print.groupedData Print a groupedData Object (nlme)
print.htest Print Values (base)
print.imwd Print an `imwd' object (wavethresh)
print.imwdc Print an `imwdc' Object (wavethresh)
print.infl Regression Diagnostics (base)
print.integrate Adaptive Integration in 1--20 Dimensions. (integrate)
print.intervals.gls Print an intervals.gls Object (nlme)
print.intervals.lme Print an intervals.lme Object (nlme)
print.krig Print kriging fit results. (funfits)
print.listof Print Values (base)
print.lm Accessing Linear Model Fits (base)
print.lm.null Accessing Linear Model Fits (base)
print.lme Print an lme Object (nlme)
print.lmList Print an lmList Object (nlme)
print.loess Local Polynomial Regression Fitting (modreg)
print.lqs Resistant Regression (lqs)
print.matrix Print Matrices (base)
print.medpolish Median Polish of a Matrix (eda)
print.modelStruct Print a modelStruct Object (nlme)
print.mona Use `print()' on a `mona' object (cluster)
print.mtable Find Aliases (Dependencies) in a Model (base)
print.nbkal Negative Binomial Model with Kalman Update (repeated)
print.nls Nonlinear Least Squares (nls)
print.nnreg Print nnreg fit results (funfits)
print.noquote Class for ``no quote'' Printing of Strings (base)
print.ordered Print Values (base)
print.pair Pairs Object Description (sgeostat)
print.pam Use `print()' on a `pam' object (cluster)
print.pdMat Print a pdMat Object (nlme)
print.plot Defunct Functions (base)
print.point Point Object Description (sgeostat)
print.polymars print.polymars - summarizes a polymars model (polymars)
print.polySpline Piecewise Polynomial Spline Representation (splines)
print.potthoff Potthoff and Roy growth curve model (growth)
print.ppolySpline Create an Interpolation Spline (splines)
print.ppr Projection Pursuit Regression (modreg)
print.prcomp Principal Components Analysis (mva)
print.princomp Principal Components Analysis (mva)
print.repeated Create a repeated object, removing NAs (rmutil)
print.reStruct Print an reStruct Object (nlme)
print.rpart Print an Rpart Object (rpart)
print.saddle.distn Print Quantiles of Saddlepoint Approximations (boot)
print.simple.list Print Values (base)
print.simplex Print Solution to Linear Programming Problem (boot)
print.smooth.spline Fit a Smoothing Spline (modreg)
print.socket Create a Socket Connection (base)
print.stepfun Step Functions (stepfun)
print.stl Seasonal Decomposition of Time Series by Loess (ts)
print.summary.agnes Use `print()' on a `summary.agnes' object (cluster)
print.summary.aov Fit an Analysis of Variance Model (base)
print.summary.aovlist Fit an Analysis of Variance Model (base)
print.summary.clara Use `print()' on a `summary.clara' object (cluster)
print.summary.corStruct Print a summary.corStruct Object (nlme)
print.summary.diana Use `print()' on a `summary.diana' object (cluster)
print.summary.fanny Use `print()' on a `summary.fanny' object (cluster)
print.summary.garch Fit GARCH Models to Time Series (tseries)
print.summary.glm Accessing Generalized Linear Model Fits (base)
print.summary.glm.null Accessing Generalized Linear Model Fits (base)
print.summary.gls Print a summary.gls Object (nlme)
print.summary.lm Accessing Linear Model Fits (base)
print.summary.lm.null Accessing Linear Model Fits (base)
print.summary.lme Print a summary.lme Object (nlme)
print.summary.lmList Print a summary.lmList Object (nlme)
print.summary.loess Local Polynomial Regression Fitting (modreg)
print.summary.modelStruct Print a summary.modelStruct Object (nlme)
print.summary.mona Use `print()' on a `summary.mona' object (cluster)
print.summary.nls Nonlinear Least Squares (nls)
print.summary.pam Use `print()' on a `summary.pam' object (cluster)
print.summary.pdMat Print a summary.pdMat Object (nlme)
print.summary.polynomial Summary of a Polynomial (polynom)
print.summary.ppr Projection Pursuit Regression (modreg)
print.summary.prcomp Principal Components Analysis (mva)
print.summary.tri Print a summary of a triangulation object (tripack)
print.summary.varComb Print a summary.varFunc Object (nlme)
print.summary.varFixed Print a summary.varFunc Object (nlme)
print.summary.varFunc Print a summary.varFunc Object (nlme)
print.summary.voronoi Print a summary of a voronoi object (tripack)
print.survfit Print a Short Summary of a Survival Curve (survival5)
print.table Print Values (base)
print.tables.aov Compute Tables of Results from an Aov Model Fit. (base)
print.tabular Defunct Functions (base)
print.tccov Create or add to a time-constant covariate (tccov) object (rmutil)
print.terms Model Terms (base)
print.tps Print thin plate spline fit results (funfits)
print.tri Print a triangulation object (tripack)
print.ts Time-Series Objects (base)
print.tskernel Smoothing Kernel Objects (ts)
print.tukeyline Robust Line Fitting (eda)
print.tvccov Create or add to a time-varying covariate (tvcov) object (rmutil)
print.varComb Print a varFunc Object (nlme)
print.varFunc Print a varFunc Object (nlme)
print.voronoi Print a voronoi object (tripack)
print.wd Print Method for a `wd' object. (wavethresh)
print.xyVector Construct an xyVector Object (splines)
printcp Displays CP table for Fitted Rpart Object (rpart)
prmat Evaluate Kriging Surface over a Grid (spatial)
prmatrix Print Matrices (base)
proc.time Running Time of R (base)
prod Product of Vector Elements (base)
profile Produce Marginal Time Profiles for Plotting (rmutil)
profile.nls Method for Profiling nls Objects (nls)
profiler Constructor for Profiler Objects for Non-Linear Models (nls)
profiler.nls Constructor for Profiler Objects from nls Objects (nls)
proj Projections of Models (base)
proj.aov Projections of Models (base)
proj.aovlist Projections of Models (base)
proj.default Projections of Models (base)
proj.lm Projections of Models (base)
prompt Produce Prototype of an R Documentation File (base)
prompt.data.frame Produce Prototype of an R Documentation File (base)
prompt.default Produce Prototype of an R Documentation File (base)
prop.test Test for Equal or Given Proportions (base)
provide Loading and Listing of Packages (base)
provide.data Making data available as data.frame (sm)
prune.misclass Cost-complexity Pruning of Tree Object (tree)
prune.rpart Cost-complexity Pruning of an Rpart Object (rpart)
prune.tree Cost-complexity Pruning of Tree Object (tree)
pruneLevels Prune Factor Levels (nlme)
pruneLevels.factor Prune Factor Levels (nlme)
pruneLevels.ordered Prune Factor Levels (nlme)
ps.options PostScript Graphics (base)
psignrank Distribution of the Wilcoxon Signed Rank Statistic (base)
Psim Simulate Binomial Spatial Point Process (spatial)
pspline Penalised smoothing splines (survival5)
pstable The Stable Distribution (stable)
pt The Student t Distribution (base)
ptukey The Studentized Range Distribution (base)
punif The Uniform Distribution (base)
putC Put Smoothed Data Into Wavelet Structure (wavethresh)
putD Put Wavelet Coefficients Into Wavelet Structure (wavethresh)
pweibull The Weibull Distribution (base)
pwilcox Distribution of the Wilcoxon Rank Sum Statistic (base)
pyears Person Years (survival5)

-- Q --

q Terminate an R Session (base)
qbeta The Beta Distribution (base)
qbinom The Binomial Distribution (base)
qcauchy The Cauchy Distribution (base)
qchisq The (non-central) Chi-Square Distribution (base)
qda Quadratic Discriminant Analysis (MASS)
qdiscrete Discrete Distribution (e1071)
qexp The Exponential Distribution (base)
qf The F Distribution (base)
qgamma The Gamma Distribution (base)
qgeom The Geometric Distribution (base)
qhyper The Hypergeometric Distribution (base)
qlnorm The Log Normal Distribution (base)
qlogis The Logistic Distribution (base)
qlogspline Logspline Density Estimation (logspline)
qnbinom The Negative Binomial Distribution (base)
qnchisq Defunct Functions (base)
qnorm The Normal Distribution (base)
qpois The Poisson Distribution (base)
qqline Quantile-Quantile Plots (base)
qqnorm Quantile-Quantile Plots (base)
qqnorm.gls Normal Plot of Residuals from a gls Object (nlme)
qqnorm.lme Normal Plot of Residuals or Random Effects from an lme Object (nlme)
qqplot Quantile-Quantile Plots (base)
qr The QR Decomposition of a Matrix (base)
QR.Auxiliaries Reconstruct the Q, R, or X Matrices from a QR Object (base)
qr.coef The QR Decomposition of a Matrix (base)
qr.fitted The QR Decomposition of a Matrix (base)
qr.Q Reconstruct the Q, R, or X Matrices from a QR Object (base)
qr.qty The QR Decomposition of a Matrix (base)
qr.qy The QR Decomposition of a Matrix (base)
qr.R Reconstruct the Q, R, or X Matrices from a QR Object (base)
qr.resid The QR Decomposition of a Matrix (base)
qr.solve The QR Decomposition of a Matrix (base)
qr.X Reconstruct the Q, R, or X Matrices from a QR Object (base)
qrq Linearized Quantile Estimation (quantreg)
qsignrank Distribution of the Wilcoxon Signed Rank Statistic (base)
qspreg Quantile spline regression (funfits)
qstable The Stable Distribution (stable)
qt The Student t Distribution (base)
qtukey The Studentized Range Distribution (base)
quadmap Quadratic Map (Logistic Equation) (tseries)
quakes Locations of Earthquakes off Fiji (base)
quantile Sample Quantiles (base)
quantile.default Sample Quantiles (base)
quarters Return Various Periods from a Chron or Dates Object (chron)
quasi Family Objects for Models (base)
quine Absenteeism from School in Rural New South Wales (MASS)
quit Terminate an R Session (base)
qunif The Uniform Distribution (base)
quote Substituting and Quoting Expressions (base)
qweibull The Weibull Distribution (base)
qwilcox Distribution of the Wilcoxon Rank Sum Statistic (base)

-- R --

R.home Return the R Home Directory (base)
R.Version Version Information (base)
R.version Version Information (base)
R.version.string Version Information (base)
ra2ba Convert Real Valued Array to Binary Array (bindata)
Rabbit Blood Pressure in Rabbits (MASS)
raftery.diag Raftery Lewis diagnostic: Calculate the number of iterations required for an MCMC run (coda)
rainbow Color Palettes (base)
raintest Rainbow-Test (lmtest)
Random Random Number Generation (base)
random.effects Extract Random Effects (nlme)
random.effects.lme Extract lme Random Effects (nlme)
random.effects.lmList Extract lmList Random Effects (nlme)
randu Random Numbers from Congruential Generator (base)
ranef Extract Random Effects (nlme)
ranef.lme Extract lme Random Effects (nlme)
ranef.lmList Extract lmList Random Effects (nlme)
range Range of Values (base)
range.default Range of Values (base)
rank Sample Ranks (base)
ranks Function to compute ranks from the dual (regression rankscore) process (quantreg)
rat Calculate a Rational Approximation by Continued Fractions (rational)
ratetables Census Data Sets for the Expected Survival and Person Years Functions (survival5)
rational Rational Approximation to Real Numbers (rational)
Ratkowsky2 Pasture yield data (NISTnls)
Ratkowsky3 Onion growth data (NISTnls)
rats Rat data from survival5 (survival5)
rbeta The Beta Distribution (base)
rbind Combine Columns/Rows into a Matrix (base)
rbind.data.frame Combine Columns/Rows into a Matrix (base)
rbinom The Binomial Distribution (base)
rbridge Simulation of Brownian Bridge (e1071)
rcauchy The Cauchy Distribution (base)
rchisq The (non-central) Chi-Square Distribution (base)
rdiscrete Discrete Distribution (e1071)
Re Complex Vectors (base)
read.and.check Read data interactively and check that it satisfies conditions (coda)
read.bugs Read BUGS output files (coda)
read.bugs.interactive Read BUGS output files interactively (coda)
read.fwf Read Fixed Width Format Files (base)
read.list Read a list of matrices from a file for unbalanced repeated measurements. (rmutil)
read.matrix Read Matrix Data (tseries)
read.octave Read Octave Data File (e1071)
read.pnm Portable Anymap Images (e1071)
read.socket Read from or Write to a Socket (base)
read.surv Read a list of matrices from a file for use with kalsurv. (rmutil)
read.table Data Input (base)
read.table.url Read Data and Code from a Web Server (base)
read.ts Read Time Series Data (tseries)
readline Read a Line from the Terminal (base)
real Real Vectors (base)
recalc Recalculate Condensed Linear Model Object (nlme)
recalc.corAR1 Recalculate for corStruct Object (nlme)
recalc.corARMA Recalculate for corStruct Object (nlme)
recalc.corCAR1 Recalculate for corStruct Object (nlme)
recalc.corCompSymm Recalculate for corStruct Object (nlme)
recalc.corHF Recalculate for corStruct Object (nlme)
recalc.corIdent Recalculate for corStruct Object (nlme)
recalc.corSpatial Recalculate for corStruct Object (nlme)
recalc.corStruct Recalculate for corStruct Object (nlme)
recalc.corSymm Recalculate for corStruct Object (nlme)
recalc.modelStruct Recalculate for a modelStruct Object (nlme)
recalc.reStruct Recalculate for an reStruct Object (nlme)
recalc.varFunc Recalculate for varFunc Object (nlme)
Recall Recursive Calling (base)
rect Draw a Rectangle (base)
rectangle.window Computes the Coefficients of a Rectangle Window. (e1071)
reduce.nn Reduce Training Set for a k-NN Classifier (class)
reformulate Modify Terms Objects (base)
regexpr Pattern Matching and Replacement (base)
relevel Reorder Levels of Factor (base)
relevel.default Reorder Levels of Factor (base)
relevel.factor Reorder Levels of Factor (base)
relevel.ordered Reorder Levels of Factor (base)
remission Cancer Remission and Cell Activity (boot)
REMOVE Remove Add-on Packages (base)
remove Remove Objects from a Specified Environment (base)
rep Replicate Elements (base)
repeat Control Flow (base)
repeated Non-normal Repeated Measurements Library (repeated)
replace Replace Values in a Vector (base)
replications Number of Replications of Terms (base)
require Loading and Listing of Packages (base)
resample Resample new pattern set from existing one (snns)
reset Reset-Test (lmtest)
resid Extract Model Residuals (base)
residuals Extract Model Residuals (base)
residuals.coxph Calculate Residuals for a `coxph' Fit (survival5)
residuals.default Extract Model Residuals (base)
residuals.fmr Fit a Generalized Nonlinear Regression Model with a Two or Three Point Mixture (gnlm)
residuals.gar Generalized autoregression (repeated)
residuals.garch Fit GARCH Models to Time Series (tseries)
residuals.glm Compute Residuals for `survreg' Objects (survival4)
residuals.gls Extract gls Residuals (nlme)
residuals.glsStruct Calculate glsStruct Residuals (nlme)
residuals.gnlr Fit a Generalized Nonlinear Regression Model (gnlm)
residuals.gnlr3 Fit a Generalized Nonlinear Regression Model for Three Parameter Distributions (gnlm)
residuals.gnls Extract gnls Residuals (nlme)
residuals.gnlsStruct Calculate gnlsStruct Residuals (nlme)
residuals.lm Accessing Linear Model Fits (base)
residuals.lme Extract lme Residuals (nlme)
residuals.lmeStruct Calculate lmeStruct Residuals (nlme)
residuals.lmList Extract lmList Residuals (nlme)
residuals.locfit Residuals from a "locfit" object. (locfit)
residuals.lqs Resistant Regression (lqs)
residuals.nbkal Negative Binomial Model with Kalman Update (repeated)
residuals.nlmeStruct Calculate nlmeStruct Residuals (nlme)
residuals.nlr Nonlinear Regression (gnlm)
residuals.nls Nonlinear Least Squares (nls)
residuals.potthoff Potthoff and Roy growth curve model (growth)
residuals.rpart Residuals From a Fitted Rpart Object (rpart)
residuals.survreg Compute Residuals for `survreg' Objects (survival5)
residuals.tukeyline Robust Line Fitting (eda)
restart Restart an Expression (base)
restovec Create a response object (rmutil)
reStruct Random Effects Structure (nlme)
return Function Definition (base)
rev Reverse a Vector's Elements (base)
rexp The Exponential Distribution (base)
rf The F Distribution (base)
rgamma The Gamma Distribution (base)
rgb RGB Color Specification (base)
rgeom The Geometric Distribution (base)
RHOME R Home Directory (base)
rhyper The Hypergeometric Distribution (base)
ridge Ridge regression (survival5)
rivers Lengths of Major North American Rivers (base)
rle Run Length Encoding (base)
rlm Robust Fitting of Linear Models (MASS)
rlnorm The Log Normal Distribution (base)
rlogis The Logistic Distribution (base)
rlogspline Logspline Density Estimation (logspline)
rm Remove Objects from a Specified Environment (base)
rmaov Split-plot ANOVA Model (growth)
rmna Create a repeated object, removing NAs (rmutil)
rmutil Utilities for Repeated Measurements Library (rmutil)
rmvbin Multivariate Binary Random Variates (bindata)
rmvnorm The Multivariate Normal Distribution (e1071)
rnbinom The Negative Binomial Distribution (base)
rnchisq Defunct Functions (base)
rnegbin Simulate Negative Binomial Variates (MASS)
RNG Random Number Generation (base)
RNGkind Random Number Generation (base)
rngseed Initialize random number generator seed (norm)
rnorm The Normal Distribution (base)
road Road Accident Deaths in US States (MASS)
rock Measurements on Petroleum Rock Samples (boot)
rossler A time series obtained by sampling the first variable (X) of the Rossler system. See the help file rossler.state for details of the system. (funfits)
rossler.state A multivariate time series of the form W_t=f(W_t-1) + e_t. The Rossler system is a system of three first order nonlinear ODEs. The system has been numerically integrated with a time step size of .1 and noise that is distributed normal with mean =0 and sigma=.1 is added at every time step. The map f is highly nonlinear and has complicated structure not easily fit by simple regression methods. The time series is created by sampling every 5 time steps. The rossler object is a matrix with columns the x,y and z values of the system at the sampling times. (funfits)
Roszman1 Quantum defects in iodine (NISTnls)
rotifer Numbers of Rotifers by Fluid Density (MASS)
Round Rounding of Numbers (base)
round Rounding of Numbers (base)
row Row Indexes (base)
row.names Data Frames (base)
row.names<- Data Frames (base)
row/colnames Row and Columnn Names (base)
rownames Row and Columnn Names (base)
rownames<- Row and Columnn Names (base)
rowsum Give Row Sums of a Matrix, Based on a Grouping Variable (base)
rpart Recursive Partitioning and Regression Trees (rpart)
rpart.anova Set up for `anova' Method for an Rpart Model (rpart)
rpart.branch Draws horseshoes - left child, up over, down to right child (rpart)
rpart.class Set up for `class' Method for an Rpart Model (rpart)
rpart.control Control for Rpart Models. (rpart)
rpart.exp Set up for `exp' Method for an Rpart Model (rpart)
rpart.matrix Creates model matrix from call to `rpart'. (rpart)
rpart.object Recursive Partitioning and Regression Trees Object (rpart)
rpart.poisson Set up for `poisson' Method for an Rpart Model (rpart)
rpartco Calculate Plotting Coordinates for Nodes of an Rpart Object (rpart)
rpois The Poisson Distribution (base)
Rprofile Initialization at Start of an R Session (base)
rq Quantile Regression (quantreg)
rq.formula Quantile Regression (quantreg)
rrs.test Function to compute regression rankscore test of linear hypothesis (quantreg)
rs2 Fit a Two-factor Box-Tidwell Nonlinear Response Surface (gnlm)
rs3 Fit a Three-factor Box-Tidwell Nonlinear Response Surface (gnlm)
rsignrank Distribution of the Wilcoxon Signed Rank Statistic (base)
rsq.rpart Plots the Approximate R-Square for the Different Splits (rpart)
rstable The Stable Distribution (stable)
rstandard Regression Diagnostics (base)
rstudent Regression Diagnostics (base)
rt The Student t Distribution (base)
rtpoly Find the Coefficients of a Polynomial Given its Roots (timeslab)
rtps Robust thin plate spline regression (funfits)
Rubber Accelerated Testing of Tyre Rubber (MASS)
rug Add a Rug to a Plot (base)
rumford Count Rumford's Friction Data (Rnotes)
runif The Uniform Distribution (base)
runs.test Runs Test (tseries)
ruspini Ruspini Data (cluster)
rv Residual variance from a "locfit" object. (locfit)
rv<- Substitute variance estimate on a "locfit" object. (locfit)
rw Simulate Data from a Random Walk Process (timeslab)
rweibull The Weibull Distribution (base)
rwiener Simulation of Wiener Process (e1071)
rwilcox Distribution of the Wilcoxon Rank Sum Statistic (base)
R_HOME R Home Directory (base)
R_LIBS Loading and Listing of Packages (base)

-- S --

saddle Saddlepoint Approximations for Bootstrap Statistics (boot)
saddle.distn Saddlepoint Distribution Approximations for Bootstrap Statistics (boot)
saddle.distn.object Saddlepoint Distribution Approximation Objects (boot)
salinity Water Salinity and River Discharge. (boot)
sammon Sammon's Non-Linear Mapping (multiv)
sample Random Samples and Permutations (base)
sapply Apply a Function over a List or Vector (base)
Satellite Landsat Multi-Spectral Scanner Image Data (mlbench)
save Save R Objects (base)
save.image Save R Objects (base)
save.plot Defunct Functions (base)
sawheat Yorke Penninsula Wheat Data (Rnotes)
scale Scaling and Centering of Matrices (base)
scan Read Data Values (base)
scan.url Read Data and Code from a Web Server (base)
scatter.smooth Scatter Plot with Smooth Curve Fitted by Loess (modreg)
schur Form the Schur Matrix Corresponding to AR Parameters (timeslab)
screen Creating and Controlling Multiple Screens on a Single Device (base)
screeplot Principal Components Analysis (mva)
sd Standard Deviation (base)
se.aov Internal Functions Used by model.tables (base)
se.aovlist Internal Functions Used by model.tables (base)
se.contrast Standard Errors for Contrasts in Model Terms (base)
se.contrast.aov Standard Errors for Contrasts in Model Terms (base)
se.contrast.aovlist Standard Errors for Contrasts in Model Terms (base)
search Give Search Path for R Objects (base)
seasest Calculate Box-Jenkins Estimates for a Seasonal ARIMA Model (timeslab)
seaspred Calculate Box-Jenkins Forecasts (timeslab)
seconds Return Hours, Minutes, or Seconds from a Times Object (chron)
segments Add Line Segments to a Plot (base)
selfStart Construct Self-starting Nonlinear Models (nls)
selfStart.default Construct Self-starting Nonlinear Models (nls)
selfStart.formula Construct Self-starting Nonlinear Models (nls)
semat Evaluate Kriging Standard Error of Prediction over a Grid (spatial)
seq Sequence Generation (base)
seq.dates Generate Chron or Dates Sequences (chron)
seq.default Sequence Generation (base)
sequence Create A Vector of Sequences (base)
Servo Servo Data (mlbench)
set.panel Specify a panel of plots (funfits)
setdiff Set Operations (base)
setNames Set the Names in an Object (nls)
sets Set Operations (base)
setwd Get or Set Working Directory (base)
shapiro.test Shapiro-Wilk Normality Test (ctest)
ships Ships Damage Data (MASS)
SHLIB Build Shared Library for Dynamic Loading (base)
shoes Shoe wear data of Box, Hunter and Hunter (MASS)
show.data Data Sets (base)
shrimp Percentage of Shrimp in Shrimp Cocktail (MASS)
Shuttle Shuttle Dataset (Statlog version) (mlbench)
shuttle Space Shuttle Autolander Problem (MASS)
sig.trace A significance trace for a hypothesis test (sm)
sign Sign Function (base)
signif Rounding of Numbers (base)
SignRank Distribution of the Wilcoxon Signed Rank Statistic (base)
simcfs Simulate Coeff. of a Polynomial with Zeros Outside Unit Circle (timeslab)
simpleLoess Internal modreg functions (modreg)
simplex Simplex Method for Linear Programming Problems (boot)
simplex.object Linear Programming Solution Objects (boot)
simul.commonprob Simulate Joint Binary Probabilities (bindata)
Simul.conf.interval Simultaneous confidence intervals for WARPing regression (haerdle)
Simul.conf.plot plot simultaneous confidence intervals for WARPing regression (haerdle)
simulate.lme simulate lme models (nlme)
sin Trigonometric Functions (base)
single Double Precision Vectors (base)
sinh Hyperbolic Functions (base)
sink Send R Output to a File (base)
Sitka Growth Curves for Sitka Spruce Trees in 1988 (MASS)
Sitka89 Growth Curves for Sitka Spruce Trees in 1989 (MASS)
sj Sheather-Jones criterion for nonparametric density estimation (sm)
skewness Skewness (e1071)
Skye AFM Compositions of Aphyric Skye Lavas (MASS)
sleep Students' Sleep Data (base)
sm.ancova Nonparametric analysis of covariance (sm)
sm.autoregression Nonparametric estimation of the autoregression function (sm)
sm.density Nonparametric density estimation in one, two or three dimensions. (sm)
sm.density.compare Comparison of univariate density estimates (sm)
sm.logit Nonparametric logistic regression (sm)
sm.logit.bootstrap Bootstrap goodness-of-fit test for a logistic regression model. (sm)
sm.poisson Nonparametric Poisson regression (sm)
sm.poisson.bootstrap Bootstrap goodness-of-fit test for a Poisson regression model (sm)
sm.regression Nonparametric regression with one or two covariates. (sm)
sm.regression.autocor Nonparametric regression with autocorrelated errors (sm)
sm.rm Nonparametric analysis of repeated measurements data (sm)
sm.script Run or Lists Scripts in Package sm (sm)
sm.sigma Estimation of the error standard deviation in nonparametric regression (sm)
sm.sphere Nonparametric density estimation for spherical data. (sm)
sm.survival Nonparametric regression with survival data. (sm)
sm.ts.pdf Nonparametric density estimation of stationary time series data (sm)
smooth Median Smoothing (eda)
smooth.f Smooth Distributions on Data Points (boot)
smooth.Pspline Fit a Polynomial Smoothing Spline of Arbitrary Order (pspline)
smooth.spline Fit a Smoothing Spline (modreg)
snails The Snail Mortality Data (Rnotes)
snip.rpart Snip Subtrees of an Rpart Object (rpart)
snip.rpart.mouse Internal function called from `snip.rpart' (rpart)
snip.tree Snip Parts of Tree Objects (tree)
snns.read.nn.pattern Read SNNS pattern file (snns)
snns.read.result Read SNNS result file (snns)
snns.write.nn.pattern Write SNNS pattern file (snns)
softmax identify the maximum in each row of a matrix (mda)
solve Solve a System of Equations (base)
solve.default Solve a System of Equations (base)
solve.pdBlocked Calculate Inverse of a Positive-Definite Matrix (nlme)
solve.pdDiag Calculate Inverse of a Positive-Definite Matrix (nlme)
solve.pdIdent Calculate Inverse of a Positive-Definite Matrix (nlme)
solve.pdMat Calculate Inverse of a Positive-Definite Matrix (nlme)
solve.pdNatural Calculate Inverse of a Positive-Definite Matrix (nlme)
solve.polynomial Zeros of a Polynomial (polynom)
solve.QP Solve a Quadratic Programming Problem (quadprog)
solve.QP.compact Solve a Quadratic Programming Problem (quadprog)
solve.qr Solve a System of Equations (base)
solve.reStruct Apply Solve to an reStruct Object (nlme)
Sonar Sonar, Mines vs. Rocks (mlbench)
sort Sort a Vector (base)
sort.list Ordering Permutation (base)
sortedXyData Create a sortedXyData object (nls)
sortedXyData.default Create a sortedXyData object (nls)
source Redirect Input (base)
source.url Read Data and Code from a Web Server (base)
Soybean Soybean Database (mlbench)
spacebox Boxplot of Variogram Cloud (sgeostat)
spacecloud Variogram Cloud (sgeostat)
spec Spectral Density Estimation (bats)
spec.ar Estimate Spectral Density of a Time Series from AR Fit (ts)
spec.pgram Estimate spectral density from smoothed periodogram (coda)
spec.taper Taper a Time Series (ts)
Special Special Functions of Mathematics (base)
spectrum Spectral Density Estimation (bats)
spencer Spencer's Mortality Dataset (locfit)
sphercov Spatial Covariance Functions (spatial)
spline Interpolating Splines (base)
spline.des Design Matrix for B-splines (splines)
splineDesign Design Matrix for B-splines (splines)
splinefun Interpolating Splines (base)
splineKnots Knot Vector from a Spline (splines)
splineKnots.spline Knot Vector from a Spline (splines)
splineOrder Determine the Order of a Spline (splines)
splineOrder.bSpline Determine the Order of a Spline (splines)
splineOrder.polySpline Determine the Order of a Spline (splines)
spline[fun] Interpolating Splines (base)
splint Cubic spline interpolation (funfits)
split Divide into Groups (base)
split.data.frame Divide into Groups (base)
split.default Divide into Groups (base)
split.screen Creating and Controlling Multiple Screens on a Single Device (base)
splitFormula Split a Formula (nlme)
spreg Smoothing spline regression (funfits)
sqrt Miscellaneous Mathematical Functions (base)
sreg Smoothing spline regression (funfits)
ssanova Fitting Smoothing Spline ANOVA Models (gss)
SSasymp Asymptotic Regression Model (nls)
SSasympOff Asymptotic Regression Model with an Offset (nls)
SSasympOrig Asymptotic Regression Model through the Origin (nls)
SSbiexp Biexponential model (nls)
SSfol First-order Compartment Model (nls)
SSfpl Four-parameter Logistic Model (nls)
SSI Simulates Sequential Spatial Inhibition Point Process (spatial)
SSlogis Logistic Model (nls)
SSmicmen Michaelis-Menten Model (nls)
stable The Stable Distribution (stable)
stable.mode Mode of a stable distribution (stable)
stableglm Stable Generalized Linear Regression Model (stable)
stackloss Brownlee's Stack Loss Plant Data (base)
stars Star Plots and Segment Diagrams of Multivariate Data (base)
start Encode the Terminal Times of Time Series (base)
start.default Encode the Terminal Times of Time Series (base)
Startup Initialization at Start of an R Session (base)
stat.anova GLM Anova Statistics (base)
state States of the U.S.A. (base)
state.abb States of the U.S.A. (base)
state.area States of the U.S.A. (base)
state.center States of the U.S.A. (base)
state.division States of the U.S.A. (base)
state.name States of the U.S.A. (base)
state.region States of the U.S.A. (base)
state.x77 States of the U.S.A. (base)
stats Calculate summary statistics (funfits)
stdf Standardize a Vector (timeslab)
stdres Extract Standardized Residuals from a Linear Model (MASS)
steam The Saturated Steam Pressure Data (Rnotes)
stem Stem-and-Leaf Plots (base)
step Choose a model by AIC in a Stepwise Algorithm (base)
stepAIC Choose a model by AIC in a Stepwise Algorithm (MASS)
stepfun Step Functions (stepfun)
stft Computes the Short Time Fourier Transform of a Vector (e1071)
stl Seasonal Decomposition of Time Series by Loess (ts)
stop Stop Function Execution (base)
storage.mode The (Storage) Mode of an Object (base)
storage.mode<- The (Storage) Mode of an Object (base)
stormer The Stormer Viscometer Data (Rnotes)
str Compactly Display the Structure of an Arbitrary R Object (base)
str.data.frame Compactly Display the Structure of an Arbitrary R Object (base)
str.default Compactly Display the Structure of an Arbitrary R Object (base)
strata Identify Strata Variables (survival5)
Strauss Simulates Strauss Spatial Point Process (spatial)
strheight Plotting Dimensions of Character Strings and Math Expressions (base)
stripplot 1-D Scatter Plots (base)
strsplit Split the Strings in a Vector (base)
structure Attribute Specification (base)
strwidth Plotting Dimensions of Character Strings and Math Expressions (base)
studres Extract Studentized Residuals from a Linear Model (MASS)
sub Pattern Matching and Replacement (base)
Subscript Extract or Replace Parts of an Object (base)
subset Subsetting Vectors and Data Frames (base)
subset.data.frame Subsetting Vectors and Data Frames (base)
subset.default Subsetting Vectors and Data Frames (base)
subsets functions for subset selection (leaps)
subsets.default functions for subset selection (leaps)
subsets.formula functions for subset selection (leaps)
substitute Substituting and Quoting Expressions (base)
substr Extract Substrings from a Character Vector (base)
substring Extract Substrings from a Character Vector (base)
sugar Fisher's Sugar Beet Data (Rnotes)
sum Sum of Vector Elements (base)
summary Object Summaries (base)
summary.agnes Summary method for `agnes' objects (cluster)
summary.aov Fit an Analysis of Variance Model (base)
summary.aovlist Fit an Analysis of Variance Model (base)
summary.clara Summary method for `clara' objects (cluster)
summary.corAR1 Summarize a corStruct Object (nlme)
summary.corARMA Summarize a corStruct Object (nlme)
summary.corCAR1 Summarize a corStruct Object (nlme)
summary.corCompSymm Summarize a corStruct Object (nlme)
summary.corExp Summarize a corStruct Object (nlme)
summary.corGaus Summarize a corStruct Object (nlme)
summary.corHF Summarize a corStruct Object (nlme)
summary.corIdent Summarize a corStruct Object (nlme)
summary.corLin Summarize a corStruct Object (nlme)
summary.corSpher Summarize a corStruct Object (nlme)
summary.corStruct Summarize a corStruct Object (nlme)
summary.corSymm Summarize a corStruct Object (nlme)
Summary.data.frame Internal and Group Methods and Generic Functions (base)
summary.data.frame Object Summaries (base)
summary.default Object Summaries (base)
summary.diana Summary method for `diana' objects (cluster)
summary.ecdf Empirical Cumulative Distribution Function (stepfun)
summary.emclust Summary method for `emclust' objects. (mclust)
summary.emclust1 Summary method for `emclust1' objects. (mclust)
Summary.factor Internal and Group Methods and Generic Functions (base)
summary.factor Object Summaries (base)
summary.fanny Summary Method for `fanny' Objects (cluster)
summary.garch Fit GARCH Models to Time Series (tseries)
summary.glm Accessing Generalized Linear Model Fits (base)
summary.glm.null Accessing Generalized Linear Model Fits (base)
summary.gls Summarize a gls Object (nlme)
summary.gssanova Assessing Smoothing Spline ANOVA Fits with Non Gaussian Responses (gss)
summary.imwd Summary Methods for `imwd' and `imwdc' Object (wavethresh)
summary.imwdc Summary Methods for `imwd' and `imwdc' Object (wavethresh)
summary.infl Regression Diagnostics (base)
summary.krig Summary for krigging fit (funfits)
summary.lm Accessing Linear Model Fits (base)
summary.lm.null Accessing Linear Model Fits (base)
summary.lme Summarize an lme Object (nlme)
summary.lmList Summarize an lmList Object (nlme)
summary.loess Local Polynomial Regression Fitting (modreg)
summary.loglm Summary Method Function for Objects of Class `loglm' (MASS)
summary.matrix Object Summaries (base)
summary.mcmc Summary statistics for Markov Chain Monte Carlo chains (coda)
summary.mcmc.list Summary statistics for Markov Chain Monte Carlo chains (coda)
summary.meta.DSL Random effects (DerSimonian-Laird) meta-analysis (rmeta)
summary.meta.MH Fixed effects (Mantel-Haenszel) meta-analysis (rmeta)
summary.mlm Accessing Linear Model Fits (base)
summary.modelStruct Summarize a modelStruct Object (nlme)
summary.mona Summary Method for `mona' Objects (cluster)
summary.multilm Stabilized Multivariate Tests (multilm)
summary.negbin Summary Method Function for Objects of Class `negbin' (MASS)
summary.netfit Summary of parameters of netfit object (funfits)
summary.nls Nonlinear Least Squares (nls)
summary.nlsList Summarize an nlsList Object (nlme)
summary.nnreg Summary for neural net regression (funfits)
summary.pam Summary Method for `pam' Objects (cluster)
summary.pdBlocked Summarize a pdMat Object (nlme)
summary.pdCompSymm Summarize a pdMat Object (nlme)
summary.pdDiag Summarize a pdMat Object (nlme)
summary.pdIdent Summarize a pdMat Object (nlme)
summary.pdMat Summarize a pdMat Object (nlme)
summary.pdNatural Summarize a pdMat Object (nlme)
summary.polymars summary.polymars - summarizes a polymars model (polymars)
Summary.polynomial Summary Group Methods for Polynomials (polynom)
summary.polynomial Summary of a Polynomial (polynom)
summary.ppr Projection Pursuit Regression (modreg)
summary.prcomp Principal Components Analysis (mva)
summary.princomp Principal Components Analysis (mva)
summary.rlm Summary Method for Robust Linear Models (MASS)
summary.rpart Summarize a Fitted Rpart Object (rpart)
summary.ssanova Assessing Smoothing Spline ANOVA Fits (gss)
summary.stepfun Step Functions (stepfun)
summary.subsets functions for subset selection (leaps)
summary.survfit Summary of a Survival Curve (survival5)
summary.tps Summary for thin plate spline regression (funfits)
summary.tri Return a summary of a triangulation object (tripack)
summary.varComb Summarize varFunc Object (nlme)
summary.varConstPower Summarize varFunc Object (nlme)
summary.VarCorr.lme Extract variance and correlation components (nlme)
summary.varExp Summarize varFunc Object (nlme)
summary.varFixed Summarize varFunc Object (nlme)
summary.varFunc Summarize varFunc Object (nlme)
summary.varIdent Summarize varFunc Object (nlme)
summary.varPower Summarize varFunc Object (nlme)
summary.voronoi Return a summary of a voronoi object (tripack)
summary.wd Summary Method for `wd' (1D Wavelet) Object (wavethresh)
sunflowerplot Produce a Sunflower Scatter Plot (base)
sunspot Annual Mean Sunspot Numbers (boot)
sunspot.month Yearly Sunspot Data, 1700--1988. Monthly Sunspot Data, 1749--1997. (ts)
sunspot.year Yearly Sunspot Data, 1700--1988. Monthly Sunspot Data, 1749--1997. (ts)
sunspots Monthly Mean Relative Sunspot Numbers (base)
supplc Supplementary Columns in Correspondence Analysis (multiv)
supplr Supplementary Rows in Correspondence Analysis (multiv)
support Compute support of wavelet (wavethresh)
supsmu Friedman's SuperSmoother (modreg)
surf.gls Fits a Trend Surface by Generalized Least-squares (spatial)
surf.ls Fits a Trend Surface by Least-squares (spatial)
surface Plots a surface (funfits)
surface.addreg Plots a surface and contours (funfits)
surface.krig Plots a surface and contours (funfits)
surface.nnreg Plots a surface and contours (funfits)
surface.surface Plots a surface (funfits)
surface.tps Plots a surface and contours (funfits)
surrogate Generate Surrogate Data (tseries)
Surv Create a Survival Object (survival5)
survdiff Test Survival Curve Differences (survival5)
survexp Compute Expected Survival (survival5)
survexp.az Census Data Sets for the Expected Survival and Person Years Functions (survival5)
survexp.azr Census Data Sets for the Expected Survival and Person Years Functions (survival5)
survexp.fit Work Function to Compute Expected Survival (survival5)
survexp.fl Census Data Sets for the Expected Survival and Person Years Functions (survival5)
survexp.flr Census Data Sets for the Expected Survival and Person Years Functions (survival5)
survexp.minnwhite US mortality data tables (ratetables)
survexp.minwhite US mortality data tables (ratetables)
survexp.mn Census Data Sets for the Expected Survival and Person Years Functions (survival5)
survexp.mnwhite Census Data Sets for the Expected Survival and Person Years Functions (survival5)
survexp.us Census Data Sets for the Expected Survival and Person Years Functions (survival5)
survexp.usr Census Data Sets for the Expected Survival and Person Years Functions (survival5)
survexp.uswhite US mortality data tables (ratetables)
survexp.wnc US mortality data tables (ratetables)
survey Student Survey Data (MASS)
survfit Compute a Survival Curve for Censored Data (survival5)
survfit.object Survival Curve Object (survival5)
survival Survival of Rats after Radiation Doses (boot)
survkit Weibull and Cox Models with Random Effects (event)
survobrien O'Brien's Test for Association of a Single Variable with Survival (survival5)
survreg Regression for a Parametric Survival Model (survival5)
survreg.object Parametric Survival Model Object (survival5)
survreg.old Old (survival4) Regression for a parametric survival model (survival5)
survsum Kaplan-Meier Survival Curve and Percentages at Selected Times (survival5)
svd Singular Value Decomposition of a Matrix (base)
svdpls1a Univariate Partial Least Squares Regression (pls)
svdpls1b Univariate Partial Least Squares Regression (pls)
svdpls1c Univariate Partial Least Squares Regression (pls)
sweep Sweep out Array Summaries (base)
swiss Swiss Fertility and Socioeconomic Indicators (1888) Data (base)
switch Select One of a List of Alternatives (base)
swp Sweep a Matrix (timeslab)
swq Sweep a Matrix (timeslab)
symbol.C Foreign Function Interface (base)
symbol.For Foreign Function Interface (base)
symbols Not Yet Implemented Functions and Unused Arguments (base)
symnum Symbolic Number Coding (base)
synth.te Synthetic Classification Problem (MASS)
synth.tr Synthetic Classification Problem (MASS)
sys.call Functions to Access the Function Call Stack (base)
sys.calls Functions to Access the Function Call Stack (base)
sys.frame Functions to Access the Function Call Stack (base)
sys.frames Functions to Access the Function Call Stack (base)
sys.function Functions to Access the Function Call Stack (base)
sys.nframe Functions to Access the Function Call Stack (base)
sys.on.exit Functions to Access the Function Call Stack (base)
sys.parent Functions to Access the Function Call Stack (base)
sys.parents Functions to Access the Function Call Stack (base)
sys.status Functions to Access the Function Call Stack (base)
system Invoke a System Command (base)
system.file Find Names of R System Files (base)
system.test Defunct Functions (base)
system.time CPU Time Used (base)

-- T --

T Logical Vectors (base)
t Matrix Transpose (base)
t.data.frame Matrix Transpose (base)
t.default Matrix Transpose (base)
t.test Student's t-Test (base)
table Cross Tabulation (base)
tabulate Tabulation for Vectors (base)
tan Trigonometric Functions (base)
tanh Hyperbolic Functions (base)
tapply Apply a Function Over a ``Ragged'' Array (base)
tau Tau Particle Decay Modes (boot)
tccov Create a Vector of Time-constant Covariates for a Point Process (event)
tcctomat Create or add to a time-constant covariate (tccov) object (rmutil)
tcltk A minimal R/Tcl-Tk Interface (tcltk)
tcm Yields on Treasury Securities (tseries)
TDist The Student t Distribution (base)
tempfile Create Unique Names for (Temporary) Files (base)
terasvirta.test Teraesvirta Neural Network Test for Nonlinearity (tseries)
terasvirta.test.default Teraesvirta Neural Network Test for Nonlinearity (tseries)
terasvirta.test.ts Teraesvirta Neural Network Test for Nonlinearity (tseries)
terms Model Terms (base)
terms.aovlist Model Terms (base)
terms.default Model Terms (base)
terms.formula Model Terms (base)
terms.terms Model Terms (base)
terrain.colors Color Palettes (base)
tetragamma Special Functions of Mathematics (base)
text Add Text to a Plot (base)
text.default Add Text to a Plot (base)
text.rpart Place Text on a Dendrogram (rpart)
theta.md Estimate theta of the Negative Binomial by Deviance (MASS)
theta.mm Estimate theta of the Negative Binomial by Moments (MASS)
thin Thinning interval (coda)
threshold Thresholding Wavelets - Generic function (wavethresh)
threshold.imwd Threshold an `imwd' Object (2D Wavelet) (wavethresh)
threshold.imwdc Threshold an `imwdc' Object (2D Wavelet) (wavethresh)
threshold.wd Threshold a `wd' Object (1D Wavelet) (wavethresh)
Thurber Electron mobility data (NISTnls)
tile.tree Add Class Barplots to a Classification Tree Plot (tree)
tilt.boot Non-parametric Tilted Bootstrap (boot)
time Sampling Times of Time Series (base)
time.default Sampling Times of Time Series (base)
time.ts Sampling Times of Time Series (base)
times Generate Dates and Times Components from Input (chron)
Titanic Survival of passengers on the Titanic (base)
title Plot Annotation (base)
tkeval A minimal R/Tcl-Tk Interface (tcltk)
tkexit A minimal R/Tcl-Tk Interface (tcltk)
tkget A minimal R/Tcl-Tk Interface (tcltk)
tkloop A minimal R/Tcl-Tk Interface (tcltk)
tkreset A minimal R/Tcl-Tk Interface (tcltk)
tkset A minimal R/Tcl-Tk Interface (tcltk)
tlpoly Evaluate a Polynomial at a Vector of Points (timeslab)
toepl Form Symmetric Toeplitz Matrix Given its First Row (timeslab)
toeplitz Form Symmetric Toeplitz Matrix (ts)
ToothGrowth The Effect of Vitamin C on Tooth Growth in Guinea Pigs (base)
topo Spatial Topographic Data (spatial)
topo.colors Color Palettes (base)
tpast Create a Vector of Times Past since Previous Events for a Point Process (event)
tps Thin plate spline regression (funfits)
tpsreg Thin plate spline regression ~function to do ??? (funfits)
trace Trace All Calls to a Function. (base)
traceback Print Call Stack of Last Error (base)
traceplot Trace plot of MCMC output (coda)
Traffic Effect of Swedish Speed Limits on Accidents (MASS)
transform Transform an Object, e.g. a Data Frame (base)
transform.data.frame Transform an Object, e.g. a Data Frame (base)
transform.default Transform an Object, e.g. a Data Frame (base)
tree Fit a Classification or Regression Tree (tree)
tree.control Select Parameters for Tree (tree)
tree.screens Split Screen for Plotting Trees (tree)
treering Yearly Treering Data, -6000--1979. (ts)
trees Girth, Height and Volume for Black Cherry Trees (base)
tri A triangulation object (tripack)
tri.find Locate a point in a triangulation (tripack)
tri.mesh Create a delaunay triangulation (tripack)
triangles Extract a list of triangle from a triangulation object (tripack)
Trig Trigonometric Functions (base)
trigamma Trigamma Function (MASS)
trmat Evaluate Trend Surface over a Grid (spatial)
trq Function to compute analogues of the trimmed mean for the linear regression model. (quantreg)
trq.print Print a Trimmed Regression Quantile Summary (quantreg)
TRUE Logical Vectors (base)
truehist Plot a Histogram (MASS)
trunc Rounding of Numbers (base)
trunc.default Rounding of Numbers (base)
ts Time-Series Objects (base)
ts-internal Internal ts functions (ts)
ts.intersect Bind Two or More Time Series (ts)
ts.plot Plot Multiple Time Series (ts)
ts.union Bind Two or More Time Series (ts)
tsboot Bootstrapping of Time Series (boot)
tsp Tsp Attribute of Time-Series-like Objects (base)
tsp<- Tsp Attribute of Time-Series-like Objects (base)
tsvar Calculate Sample Variance of a Time Series (timeslab)
ttime Create a Vector of Total Time Elapsed for each Individual for a Point Process (event)
Tukey The Studentized Range Distribution (base)
tuna Tuna Sighting Data (boot)
tvcov Create a Vector of Time-varying Covariates for a Point Process (event)
tvctomat Create or add to a time-varying covariate (tvcov) object (rmutil)
twins.object Hierarchical Clustering Object (cluster)
typeof The Type of an Object (base)

-- U --

UCBAdmissions Student Admissions at UC Berkeley (base)
ucv Unbiased Cross-Validation for Bandwidth Selection (MASS)
UKDriverDeaths Deaths of Car Drivers in Great Britain 1969--84 (ts)
UKLungDeaths Monthly Deaths from Lung Diseases in the UK (ts)
unclass Object Classes (base)
uncompress Decompression - Generic function (wavelet) (wavethresh)
uncompress.default Decompress a Compressed or Uncompressed Object (wavethresh)
uncompress.imwdc Use `uncompress()' on an `imwdc' object (wavethresh)
uncompressed.object Uncompressed (Wavelet) Object (wavethresh)
undebug Debug a function (base)
undoc Find Undocumented Objects (base)
Uniform The Uniform Distribution (base)
union Set Operations (base)
unique Extract Unique Elements (base)
uniroot One Dimensional Root Finding (base)
units Graphical Units (base)
unix Invoke a System Command (base)
unix.time CPU Time Used (base)
unlink Delete Files and Directories (base)
unlist Flatten Lists (base)
unname Remove `names' or `dimnames' (base)
unpack8bit Packing of 8-bit Integers (wavethresh)
untangle.specials Help Process the `specials' Argument of the `terms' Function. (survival5)
untrace Trace All Calls to a Function. (base)
update Update and Re-fit a Model Call (base)
update.default Update and Re-fit a Model Call (base)
update.formula Model Updating (base)
update.gls Update a gls Object (nlme)
update.gnls Update a gnls Object (nlme)
update.groupedData Update a groupedData Object (nlme)
update.lme Update an lme Object (nlme)
update.lmList Update an lmList Object (nlme)
update.modelStruct Update a modelStruct Object (nlme)
update.nlme Update an nlme Object (nlme)
update.nlsList Update an nlsList Object (nlme)
update.packages Download Packages from CRAN (base)
update.varComb Update varFunc Object (nlme)
update.varConstPower Update varFunc Object (nlme)
update.varExpon Update varFunc Object (nlme)
update.varFunc Update varFunc Object (nlme)
update.varPower Update varFunc Object (nlme)
upgrade.mcmc Upgrade mcmc objects in obsolete format (coda)
upper.tri Lower and Upper Triangular Part of a Matrix (base)
urine Urine Analysis Data (boot)
url.show Read Data and Code from a Web Server (base)
USAccdeaths Accidental Deaths in the US 1973--1978 (ts)
USArrests Violent Crime Rates by US State (base)
UScereal Nutritional and Marketing Information on US Cereals. (MASS)
UScrime The Effect of Punishment Regimes on Crime Rates (MASS)
UseMethod Class Methods (base)
USJudgeRatings Lawyers' Ratings of State Judges in the US Superior Court (base)
USPersonalExpenditure Personal Expenditure Data (base)
uspop The Population of the United States (base)

-- V --

VA Veteran's Administration lung cancer trial. (MASS)
VADeaths Death Rate Data (base)
var Covariance Matrices (base)
var.linear Linear Variance Estimate (boot)
var.test F Test to Compare Two Variances (ctest)
varClasses Variance Function Classes (nlme)
varComb Combination of Variance Functions (nlme)
varConstPower Constant Plus Power Variance Function (nlme)
VarCorr Extract variance and correlation components (nlme)
VarCorr.lme Extract variance and correlation components (nlme)
varExp Exponential Variance Function (nlme)
varFixed Fixed Variance Function (nlme)
varFunc Variance Function Structure (nlme)
variable.names Case and Variable Names of Fitted Models (base)
variable.names.default Case and Variable Names of Fitted Models (base)
variable.names.lm Case and Variable Names of Fitted Models (base)
varIdent Constant Variance Function (nlme)
Variogram Calculate Semi-variogram (nlme)
variogram Compute Spatial Variogram (spatial)
Variogram.corExp Calculate Semi-variogram for a corExp Object (nlme)
Variogram.corGaus Calculate Semi-variogram for a corGaus Object (nlme)
Variogram.corLin Calculate Semi-variogram for a corLin Object (nlme)
Variogram.corRatio Calculate Semi-variogram for a corRatio Object (nlme)
Variogram.corSpatial Calculate Semi-variogram for a corSpatial Object (nlme)
Variogram.corSpher Calculate Semi-variogram for a corSpher Object (nlme)
Variogram.default Calculate Semi-variogram (nlme)
Variogram.gls Calculate Semi-variogram for Residuals from a gls Object (nlme)
Variogram.lme Calculate Semi-variogram for Residuals from an lme Object (nlme)
varPower Power Variance Function (nlme)
varWeights Extract Variance Function Weights (nlme)
varWeights.glsStruct Variance Weights for glsStruct Object (nlme)
varWeights.lmeStruct Variance Weights for lmeStruct Object (nlme)
varWeights.varComb Extract Variance Function Weights (nlme)
varWeights.varFunc Extract Variance Function Weights (nlme)
vcov Calculate Variance-Covariance Matrix for a Fitted Model Object (MASS)
vcov.nlregb Calculate Variance-Covariance Matrix for a `nlregb' Fit (MASS)
vector Vectors (base)
Vehicle Vehicle Silhouettes (mlbench)
Version Defunct Functions (base)
version Version Information (base)
veteran Veterans' Administration Lung Cancer study (survival5)
vgfast Fast variogram for replicated fields (funfits)
vgram Variogram (funfits)
vi Invoke a Text Editor (base)
volcano Topographic Information for the Maunga Whau Volcano (base)
voronoi Voronoi object (tripack)
voronoi.mosaic Create a Voronoi mosaic (tripack)
votes.repub Votes for Republican Candidate in Presidential Elections (cluster)
Vowel Vowel Recognition (Deterding data) (mlbench)

-- W --

waders Counts of Waders at 15 Sites in South Africa (MASS)
warning Warning Messages (base)
warnings Print Warning Messages (base)
warpbreaks The Number of Breaks in Yarn during Weaving (base)
warping smoothed histogram by WARPing (haerdle)
warping.step plot WARPing estimates as step functions (haerdle)
wd Discrete wavelet transform (decomposition). (wavethresh)
wd.object Wavelet decomposition object (1D) (wavethresh)
weekdays Return Various Periods from a Chron or Dates Object (chron)
Weibull The Weibull Distribution (base)
weighted.mean Weighted Arithmetic Mean (base)
weighted.residuals Computed Weighted Residuals (base)
weights Accessing Linear Model Fits (base)
weights.default Accessing Linear Model Fits (base)
weights.fmr Fit a Generalized Nonlinear Regression Model with a Two or Three Point Mixture (gnlm)
weights.gnlr Fit a Generalized Nonlinear Regression Model (gnlm)
weights.gnlr3 Fit a Generalized Nonlinear Regression Model for Three Parameter Distributions (gnlm)
weights.lm Accessing Linear Model Fits (base)
weights.nlr Nonlinear Regression (gnlm)
weights.nls Nonlinear Least Squares (nls)
weights.stable Stable Generalized Linear Regression Model (stable)
which Which indices are TRUE ? (base)
which.is.max Find Maximum Position in Vector (nnet)
while Control Flow (base)
white.test White Neural Network Test for Nonlinearity (tseries)
white.test.default White Neural Network Test for Nonlinearity (tseries)
white.test.ts White Neural Network Test for Nonlinearity (tseries)
whiteside House Insulation: Whiteside's Data (MASS)
width.SJ Bandwidth Selection by Pilot Estimation of Derivatives (MASS)
wilcox.test Wilcoxon Rank Sum and Signed Rank Tests (ctest)
Wilcoxon Distribution of the Wilcoxon Rank Sum Statistic (base)
window Time Windows (base)
window.default Time Windows (base)
window.mcmc Time windows for mcmc objects (coda)
window.ts Time Windows (base)
windowf Calculate Nonparamteric Spectral Density Estimate (timeslab)
wn Simulate White Noise Data (timeslab)
wntest Form Plots for White Noise Test (timeslab)
women Average Heights and Weights for American Women (base)
wool Australian Relative Wool Prices (boot)
wr Discrete wavelet transform (reconstruction). (wavethresh)
write Write Data to a File (base)
write.data Writes data set out to a file (funfits)
write.matrix Write a Matrix or Data Frame (MASS)
write.pgm Portable Anymap Images (e1071)
write.socket Read from or Write to a Socket (base)
write.table Data Output (base)
wtloss Weight Loss Data from an Obese Patient (MASS)
wvrelease Identify version of wavelet software. (wavethresh)

-- X --

X11 X Window System Graphics (base)
x11 X Window System Graphics (base)
xedit Invoke a Text Editor (base)
xemacs Invoke a Text Editor (base)
xgobi XGobi: Dynamic Graphics for Data Analysis (xgobi)
xgvis xgvis: interactive multidimensional scaling using xgobi for display (xgobi)
xinch Graphical Units (base)
xline Draw a vertical line (funfits)
xor Logical Operators (base)
xor.bench Continuous XOR Benchmark Problem (snns)
xpdrows.data.frame Data Frames (base)
xpred.rpart Return Cross-Validated Predictions (rpart)
xy.coords Extracting Plotting Structures (base)
xyinch Graphical Units (base)
xyVector Construct an xyVector Object (splines)

-- Y --

years Return Various Periods from a Chron or Dates Object (chron)
yinch Graphical Units (base)
yline Draw a horizontal line (funfits)

-- Z --

zapsmall Rounding of Numbers (base)
zip.file.extract Extract File from a Zip Archive (base)